Corynebacterium variabile: CVAR_0934
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Entry
CVAR_0934 CDS
T01594
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cva
Corynebacterium variabile
Pathway
cva03030
DNA replication
cva03430
Mismatch repair
cva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVAR_0934 (holA)
03430 Mismatch repair
CVAR_0934 (holA)
03440 Homologous recombination
CVAR_0934 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cva03032
]
CVAR_0934 (holA)
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_0934 (holA)
Enzymes [BR:
cva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVAR_0934 (holA)
DNA replication proteins [BR:
cva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVAR_0934 (holA)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVAR_0934 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Gp89
DUF4687
CoxE_N
Motif
Other DBs
NCBI-ProteinID:
AEK36287
UniProt:
G0HCC5
LinkDB
All DBs
Position
1061324..1062337
Genome browser
AA seq
337 aa
AA seq
DB search
MAGMAPASSVSSTRPSATAQVYLIVGGDDFLAERRRTAIVEEARRSAGNPDLPVEMRKVS
EIDAGELAELLSPSLFAEDRVVAVTGLAEASKDTAGLIEAAVADPAPGVVLILQHSGKGR
QKALVTSLPKKAPTGALQVLSAEELKGRERAGFIDAEFRDAGVRVSPDVTEALLDAVGTD
LRELASAVSQLVSDTGGKVTAAAVHRYYQGSAEVSGFDVAEYAVSGRTDQAVGAARRALQ
LGVPHVLLASALSGMMGDIAKVHGVGRINARAQAAEFGMPPWKLEKTVRLARAWTAAGVA
AAVQVVAELDAGVKGWAADPEYAVEDAVRRISVLARG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatggctccagcgtcttccgtgtcatccacgcgcccgtcggccaccgcacag
gtgtacctcatcgtcggcggggacgacttcctcgctgagcgacggcgcaccgcgatcgtc
gaggaagccaggcgctccgccggcaaccctgacctgccggtggagatgcgcaaggtcagc
gagatcgacgccggggaactggccgagctgctcagcccctccctgttcgccgaggaccgt
gtcgtcgcggtcaccggactggccgaggcatccaaggacaccgccggactcatcgaggcc
gccgtcgccgatcctgcgccgggcgtggtcctgattctccagcactccggcaaggggcgc
cagaaggcactggtcaccagcctgccgaagaaggcacccaccggtgccctgcaggtgctc
tccgccgaagaactcaagggccgggaacgcgcgggtttcatcgacgccgaattccgggac
gccggggtgcgcgtcagcccggacgtcaccgaggctctgctggacgccgtgggtacggac
ctgcgtgaactggccagcgccgtcagtcagctcgtctccgacaccggcgggaaggtcacc
gccgccgcggtccaccgctattaccagggctcggccgaggtctccggcttcgatgtcgcc
gagtacgccgtgtccgggcggaccgaccaggcggtgggggcggcgcgccgggcactgcag
ctgggcgtcccgcatgtgctgctggcctccgcactgtccgggatgatgggggacatcgcc
aaggtgcacggggtgggacggatcaacgcccgtgcccaggcggcggagttcggcatgccg
ccgtggaagctggagaagaccgtccggctggcacgggcgtggacggcggccggggtcgcc
gccgcagtccaggtcgtcgcggagctggacgccggggtgaagggctgggcggcggatccc
gagtacgcggttgaggatgctgtcagacgcatttccgttctcgcacgggggtaa
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