Corynebacterium variabile: CVAR_0939
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Entry
CVAR_0939 CDS
T01594
Symbol
phdD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva00010
Glycolysis / Gluconeogenesis
cva00020
Citrate cycle (TCA cycle)
cva00260
Glycine, serine and threonine metabolism
cva00280
Valine, leucine and isoleucine degradation
cva00310
Lysine degradation
cva00380
Tryptophan metabolism
cva00620
Pyruvate metabolism
cva00630
Glyoxylate and dicarboxylate metabolism
cva00640
Propanoate metabolism
cva00670
One carbon pool by folate
cva00785
Lipoic acid metabolism
cva01100
Metabolic pathways
cva01110
Biosynthesis of secondary metabolites
cva01120
Microbial metabolism in diverse environments
cva01200
Carbon metabolism
cva01210
2-Oxocarboxylic acid metabolism
cva01240
Biosynthesis of cofactors
Module
cva_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cva_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cva_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cva_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CVAR_0939 (phdD)
00020 Citrate cycle (TCA cycle)
CVAR_0939 (phdD)
00620 Pyruvate metabolism
CVAR_0939 (phdD)
00630 Glyoxylate and dicarboxylate metabolism
CVAR_0939 (phdD)
00640 Propanoate metabolism
CVAR_0939 (phdD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CVAR_0939 (phdD)
00280 Valine, leucine and isoleucine degradation
CVAR_0939 (phdD)
00310 Lysine degradation
CVAR_0939 (phdD)
00380 Tryptophan metabolism
CVAR_0939 (phdD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CVAR_0939 (phdD)
00670 One carbon pool by folate
CVAR_0939 (phdD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cva04147
]
CVAR_0939 (phdD)
Enzymes [BR:
cva01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CVAR_0939 (phdD)
Exosome [BR:
cva04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CVAR_0939 (phdD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
FAD_binding_2
DAO
FAD_binding_3
UDPG_MGDP_dh_N
3HCDH_N
2-Hacid_dh_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
AEK36292
UniProt:
G0HD15
LinkDB
All DBs
Position
1067345..1068775
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AA seq
476 aa
AA seq
DB search
MAKELEQHGTVIIGAGPGGYVAAIRAAELGQQVTVIEESDTLGGICLNVGCVPSKALISA
GKRLGQAQDSTMYGITTGEVSFDFTALQDWKQHKVVDRMTKGIEGLFAKHEIEVVRGSAM
LVSDSEIQIMPAGPQQFMSVTEPRRIAFTDLIIATGSRPVEIPGFQISGRVIDSTGGLGL
ESLPKELVVIGGGYIGTELAGAYADFGTHVTILEGTDQILPGFEKDLVKVVVKKLKSKGV
TVLTGVRAKHSEQRADEVTVTYATKGGEEKKVTADYCMITVGRTPNTDSLGLDATGVELD
KHGLIKVDERGFTGVDHIWAVGDVTMGPALAHMAFMEGKTAAGAIAGRPDANEYFAVPAV
CFSDPEIATVGMTVAEAEKSGLTVHASQFPFAGNARAVSLGEGEGFVRLVSTIDTGTLVG
AQIVGPGASDLISELSVAVNCQLNVEDIALTIHPHPTLGEPVAEAADIAIGLPTHL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaactggaacaacacggcaccgtcatcatcggtgcaggccccggcgggtac
gtcgccgcgatccgtgcggcggaactcggacagcaggtcaccgtcatcgaggagtccgac
accctcggcggcatctgcctcaacgtcggctgcgtgccgtccaaggcgctgatctcggcc
ggcaagcggctgggccaggcgcaggactccaccatgtacgggatcaccaccggtgaggtc
tccttcgacttcaccgccctgcaggattggaagcagcacaaggtcgtcgaccggatgacc
aaaggcatcgaagggctgttcgccaagcatgagatcgaggtcgtccgcggctccgcgatg
ctggtcagcgacagcgagatccagatcatgccggccggcccgcagcagttcatgagtgtc
accgaaccgcggcggatcgccttcaccgacctgatcatcgccaccggctcgcgcccggtg
gagatccccggcttccagatcagcggacgcgtcatcgactcgaccggcggtctgggtctg
gagagtctaccgaaggagctcgtcgtcatcggcggcgggtacatcggcaccgaactcgct
ggcgcctacgccgacttcggtacccacgtcaccatcctcgagggcaccgaccagatcctc
cccgggttcgagaaggacctggtgaaggtcgtcgtcaagaagctgaagtccaagggcgtc
accgtgctcaccggggtgcgcgccaagcactccgagcagcgtgcggacgaggtcaccgtc
acctacgcgaccaagggcggcgaggagaagaaggtcaccgccgactactgcatgatcacc
gtcggaaggacgccgaacaccgactccctcgggctggacgccacgggtgtggaactcgac
aagcacggcctcatcaaggtcgacgagcgcgggttcaccggggtggatcacatctgggcc
gtcggtgacgtgaccatgggcccggctctggcgcacatggccttcatggagggcaagacc
gcggccggtgccatcgccggacgcccggacgccaacgagtatttcgccgtgccggcggtg
tgcttctccgacccggagatcgcgacggtcggcatgaccgtggcggaggcggagaagagc
gggctgaccgtgcacgcctcccagttccccttcgcgggcaacgcccgtgccgtgtccctg
ggtgagggcgagggcttcgtgcgtctggtctcgacgatcgacaccggcacgctcgtcggt
gctcagatcgtgggcccgggtgcctccgacctcatctcggagttgtccgtggcagtgaac
tgccagctcaacgtggaggacatcgccctgacgatccatccgcacccgacgctgggtgag
ccggtggccgaggccgcggacatcgcgatcggtctgccgacgcacctgtag
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