KEGG   Corynebacterium variabile: CVAR_0939
Entry
CVAR_0939         CDS       T01594                                 
Symbol
phdD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cva  Corynebacterium variabile
Pathway
cva00010  Glycolysis / Gluconeogenesis
cva00020  Citrate cycle (TCA cycle)
cva00260  Glycine, serine and threonine metabolism
cva00280  Valine, leucine and isoleucine degradation
cva00310  Lysine degradation
cva00380  Tryptophan metabolism
cva00620  Pyruvate metabolism
cva00630  Glyoxylate and dicarboxylate metabolism
cva00640  Propanoate metabolism
cva00670  One carbon pool by folate
cva00785  Lipoic acid metabolism
cva01100  Metabolic pathways
cva01110  Biosynthesis of secondary metabolites
cva01120  Microbial metabolism in diverse environments
cva01200  Carbon metabolism
cva01210  2-Oxocarboxylic acid metabolism
cva01240  Biosynthesis of cofactors
Module
cva_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cva_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cva_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cva_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cva00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CVAR_0939 (phdD)
   00020 Citrate cycle (TCA cycle)
    CVAR_0939 (phdD)
   00620 Pyruvate metabolism
    CVAR_0939 (phdD)
   00630 Glyoxylate and dicarboxylate metabolism
    CVAR_0939 (phdD)
   00640 Propanoate metabolism
    CVAR_0939 (phdD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CVAR_0939 (phdD)
   00280 Valine, leucine and isoleucine degradation
    CVAR_0939 (phdD)
   00310 Lysine degradation
    CVAR_0939 (phdD)
   00380 Tryptophan metabolism
    CVAR_0939 (phdD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CVAR_0939 (phdD)
   00670 One carbon pool by folate
    CVAR_0939 (phdD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cva04147]
    CVAR_0939 (phdD)
Enzymes [BR:cva01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CVAR_0939 (phdD)
Exosome [BR:cva04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CVAR_0939 (phdD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like GIDA Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C FAD_binding_2 DAO FAD_binding_3 UDPG_MGDP_dh_N 3HCDH_N 2-Hacid_dh_C Thi4
Other DBs
NCBI-ProteinID: AEK36292
UniProt: G0HD15
LinkDB
Position
1067345..1068775
AA seq 476 aa
MAKELEQHGTVIIGAGPGGYVAAIRAAELGQQVTVIEESDTLGGICLNVGCVPSKALISA
GKRLGQAQDSTMYGITTGEVSFDFTALQDWKQHKVVDRMTKGIEGLFAKHEIEVVRGSAM
LVSDSEIQIMPAGPQQFMSVTEPRRIAFTDLIIATGSRPVEIPGFQISGRVIDSTGGLGL
ESLPKELVVIGGGYIGTELAGAYADFGTHVTILEGTDQILPGFEKDLVKVVVKKLKSKGV
TVLTGVRAKHSEQRADEVTVTYATKGGEEKKVTADYCMITVGRTPNTDSLGLDATGVELD
KHGLIKVDERGFTGVDHIWAVGDVTMGPALAHMAFMEGKTAAGAIAGRPDANEYFAVPAV
CFSDPEIATVGMTVAEAEKSGLTVHASQFPFAGNARAVSLGEGEGFVRLVSTIDTGTLVG
AQIVGPGASDLISELSVAVNCQLNVEDIALTIHPHPTLGEPVAEAADIAIGLPTHL
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggccaaggaactggaacaacacggcaccgtcatcatcggtgcaggccccggcgggtac
gtcgccgcgatccgtgcggcggaactcggacagcaggtcaccgtcatcgaggagtccgac
accctcggcggcatctgcctcaacgtcggctgcgtgccgtccaaggcgctgatctcggcc
ggcaagcggctgggccaggcgcaggactccaccatgtacgggatcaccaccggtgaggtc
tccttcgacttcaccgccctgcaggattggaagcagcacaaggtcgtcgaccggatgacc
aaaggcatcgaagggctgttcgccaagcatgagatcgaggtcgtccgcggctccgcgatg
ctggtcagcgacagcgagatccagatcatgccggccggcccgcagcagttcatgagtgtc
accgaaccgcggcggatcgccttcaccgacctgatcatcgccaccggctcgcgcccggtg
gagatccccggcttccagatcagcggacgcgtcatcgactcgaccggcggtctgggtctg
gagagtctaccgaaggagctcgtcgtcatcggcggcgggtacatcggcaccgaactcgct
ggcgcctacgccgacttcggtacccacgtcaccatcctcgagggcaccgaccagatcctc
cccgggttcgagaaggacctggtgaaggtcgtcgtcaagaagctgaagtccaagggcgtc
accgtgctcaccggggtgcgcgccaagcactccgagcagcgtgcggacgaggtcaccgtc
acctacgcgaccaagggcggcgaggagaagaaggtcaccgccgactactgcatgatcacc
gtcggaaggacgccgaacaccgactccctcgggctggacgccacgggtgtggaactcgac
aagcacggcctcatcaaggtcgacgagcgcgggttcaccggggtggatcacatctgggcc
gtcggtgacgtgaccatgggcccggctctggcgcacatggccttcatggagggcaagacc
gcggccggtgccatcgccggacgcccggacgccaacgagtatttcgccgtgccggcggtg
tgcttctccgacccggagatcgcgacggtcggcatgaccgtggcggaggcggagaagagc
gggctgaccgtgcacgcctcccagttccccttcgcgggcaacgcccgtgccgtgtccctg
ggtgagggcgagggcttcgtgcgtctggtctcgacgatcgacaccggcacgctcgtcggt
gctcagatcgtgggcccgggtgcctccgacctcatctcggagttgtccgtggcagtgaac
tgccagctcaacgtggaggacatcgccctgacgatccatccgcacccgacgctgggtgag
ccggtggccgaggccgcggacatcgcgatcggtctgccgacgcacctgtag

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