Corynebacterium variabile: CVAR_1148
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Entry
CVAR_1148 CDS
T01594
Symbol
idsA
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cva
Corynebacterium variabile
Pathway
cva00900
Terpenoid backbone biosynthesis
cva01100
Metabolic pathways
cva01110
Biosynthesis of secondary metabolites
Module
cva_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CVAR_1148 (idsA)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
CVAR_1148 (idsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cva01006
]
CVAR_1148 (idsA)
Enzymes [BR:
cva01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CVAR_1148 (idsA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CVAR_1148 (idsA)
2.5.1.29 geranylgeranyl diphosphate synthase
CVAR_1148 (idsA)
Prenyltransferases [BR:
cva01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CVAR_1148 (idsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AEK36504
UniProt:
G0HEB2
LinkDB
All DBs
Position
complement(1323166..1324287)
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AA seq
373 aa
AA seq
DB search
MTYTPTSWTLDRPLADVPSAVDAELDRFFHDRHAEIDDLDPVVADGVDALEQFVTGGGKR
LRPLFAWAGVRAALDGGGGTLSGSTGPEDLLRAVGSLEFIQACALIHDDIIDHSDTRRGR
PTTHRRFEASHRGNGWSGDAVGYGESQAILVGDLAFAWADDMLVDSGVDAASLARAREPW
RKMRTEVIAGQMLDIALENSGSEDPAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVD
LLRTAGREIGIAFQLEDDHLGVFGDPQVTGKAAGDDLRSGKRTWLVMRALATADRTDPAA
AARLRAGMGTVRSDAEVDELRQIIVDSGAAAHNTGRARELTDTAVDALRTGHLGRGIVDE
LVTVAEQLTERRS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaccccgacctcctggaccctggacaggcccctggcggatgtcccgtcggcg
gtggacgccgagctggaccgtttcttccacgaccggcacgccgagatcgacgacctggat
ccggtggtcgccgacggggtggatgccctggaacagttcgtcaccggtggcggtaagcgg
ctgcgtccgttgttcgcctgggccggggtgcgcgccgctctcgacggaggtggtggaacg
ctgtccgggtcgaccgggccggaggatctgctccgcgcggtggggtcactggagttcatc
caggcctgcgcgctgatccacgacgacatcatcgaccactccgacacccggcgcgggcga
ccgacgacccaccggcgtttcgaggcgtcccaccggggcaacggctggtccggggacgcc
gtcggctacggcgagagccaggccatcctcgtcggcgacctcgccttcgcctgggccgac
gacatgctcgtcgattccggggtggacgccgcgtccctcgcccgggccagggagccctgg
cggaagatgcggaccgaggtcatcgcggggcagatgctcgacatcgcactcgagaacagc
ggctcggaggatccggcgatgtccgagaaggtcaacacctacaagaccgcggcctacacc
gtggagcggccgctgcacctgggggcggccctgggggacgcggacgcccgcaccgtcgac
ctgctgcgcaccgcaggccgggagatcggcatcgccttccagctggaggacgaccatctc
ggggtcttcggcgacccgcaggtcaccgggaaggccgccggggacgacctgcgctcgggc
aagcgcacctggctggtgatgcgtgccctggcgacggccgaccggaccgatcccgcggcc
gccgcccggctccgtgcgggcatgggtacggtgcgttccgacgccgaggtcgacgagctg
cggcagatcatcgtggactccggggccgccgcgcacaacaccggccgggcccgggaactc
accgacacggcggtggacgcgttgcgtaccggccacctgggtcgcggcatcgtcgatgag
ctcgtgaccgtggccgaacagctcaccgagcgcaggagctga
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