Corynebacterium variabile: CVAR_1381
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Entry
CVAR_1381 CDS
T01594
Name
(GenBank) transposase for insertion sequence element
Organism
cva
Corynebacterium variabile
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_7
HTH_23
HTH_38
HTH_29
HTH_32
Glyco_hydro_20b
CENP-L
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AEK36736
UniProt:
G0HCJ5
LinkDB
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Position
complement(1581550..1583043)
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AA seq
497 aa
AA seq
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MTVTMTVVERIRALDAQGMPATQIATRVGVHRDTVAKYTGIDNFSPRPLRKPFNAGTQAL
AGLTGIIDGWLDDDTHRPRKQRHTAQRIYDRLVDEHGYTGSYKTVQRFVKLRKQAAQGPT
DGYSELVWPAGQAQVDFGQATAVIAGVTTLLHLLVVTFPQSNMRYVQSFLGETAECVCQG
LRTICEHIGGVPTMMVFDNATGIGRRHRDDITESRLFAAFKAHYRTSARYCNPYAGNEKG
NVENAVGFLRRNLMVPEPAAISIDALNTDLLARCDALGARDHWRAKVPIVELFTADQQAL
IALPGVSFDPVRYETRKADKLGRIQVEGVFYLPGPAYHDRLMTVGIRHDVIEILDETDTP
VMTFARIYGEQSTTVFSPGTLLPALKAKPGSWSHSPVRAHVPDPVADWLDTADNRSRSRA
FAALEDATAATDYATAMSAAQSLITGGDDPGAGGLGMLARRLGEGIEPVASVTDLSVYDR
YNTGTATGTVSVKKVGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaccatgaccgttgtagaacgtatcagggctctcgacgcccaaggaatgccc
gcgacacagatcgcaacccgggtcggcgtacaccgcgacaccgtcgcgaagtacaccggc
atcgacaacttctccccacgaccactccgcaaacccttcaacgccggtacccaggccctg
gccggattgaccggcatcatcgacggctggctcgacgacgacactcaccggcctcggaaa
caacggcacaccgcccaacgcatctacgaccgactcgtcgacgaacacggctacaccggc
tcctacaaaaccgtccaacgcttcgtgaaactgcgtaaacaggccgcgcagggccccacc
gacggttactccgaacttgtctggcccgccggccaggcccaggtcgacttcgggcaggcc
accgcggtcatcgccggagtcaccacgctgctgcacttgttggtcgtcactttcccccag
tcgaacatgcgctacgtccagagctttctcggcgaaaccgctgaatgcgtctgccagggc
ctgcgcaccatctgcgaacacatcggcggcgtgcccaccatgatggtcttcgacaacgcc
accggcatcggacggcgccaccgcgacgacatcaccgagtcccgactgttcgccgcattc
aaggcgcactaccgcaccagtgcgcgttactgcaatccctacgccggcaatgagaaaggc
aacgtggaaaacgccgtcgggttcctacgccgcaacctgatggtccccgaacccgccgcg
atcagcatcgacgcactcaacacggaccttcttgcccgctgtgacgcactgggggccagg
gaccactggcgggcgaaagtaccgatcgttgaactgttcaccgccgatcagcaggcactc
atcgccctgcccggggtcagcttcgacccggtgcgctacgagacccgtaaagccgacaaa
ctcggccgcatccaggtcgagggtgtgttctacctgccgggaccggcctaccacgaccgg
ttgatgaccgtggggatccgccatgatgtcatcgagatcctcgacgaaaccgacaccccg
gtgatgaccttcgcccggatctacggtgagcagtcgacgaccgtgttcagtcccggcaca
ctgctgccggcgttgaaggcgaagcctggttcgtggtcgcattccccggtccgggcccat
gtccccgacccggtggcagactggctcgacaccgcggacaaccggtcccggtcacgtgcg
ttcgccgcactcgaagacgccaccgccgctaccgactacgccacggcgatgagcgcggca
cagtccctgatcaccggtggtgatgatcccggagccggtggcctggggatgctggcccgc
agactcggcgagggcatcgaaccggtcgcgtcggtcaccgacctgagtgtctacgaccgg
tacaacaccggcactgcgaccggaacagtctcggtgaagaaggtgggggcatga
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