Corynebacterium variabile: CVAR_1499
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Entry
CVAR_1499 CDS
T01594
Symbol
priA
Name
(GenBank) primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVAR_1499 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_1499 (priA)
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVAR_1499 (priA)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVAR_1499 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
AEK36852
UniProt:
G0HDY5
LinkDB
All DBs
Position
complement(1717776..1719833)
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AA seq
685 aa
AA seq
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MDLPVARVLPLLGMPHLDRLFDYSVSEELDTTARPGVRVRIRFAGRLVDAVVIERRRSTD
HEGRLSALQRVISPEVVVPPGLWDLVNLLADRYGGVRSDILRAAVPSRHASAEKAGLFGN
GVDWPELYGALEPVEDLTTAARDTALSGWSAYRHADSLLEAVLAGRSARASWLWTPGEDW
AARVAEMAATVAWSGGGVLLVVPDQRDVDRLSAELRNFLSAAQITELTASVGPAARYRRY
LAVLAGQGRVIVGTRSAATVPVPGLRLIMLTGEADDSLVDPRAPYLHARDVLKVRAEQEG
CGFIVGGAHRSAEVQQWVEEGFCPTLRADPDVLRARMPWIHALDDNHDAHQSFTRIPTAG
YKAIRQASDNGLPALVQVPRRGYAPSLACKDCRTPARCRRCNGPLELPPGDQGRAGAAEP
RCRWCGAPEGRFTCPGCGGHAVRMTVIGSDRTAEELGRAFPGVPVVLSGGSQVRDTVPDG
PRIVVATPGAEPVAESGYGAAVLLDPWLTLGRADLRASEGALRQWMEASCLVVPREQGGQ
VVLVARTDLPEAQALIRWDPEGAAATELAQRRSAGFPPATVLVAVDGTTETVKELQEILV
VPEELDRLEVLGPVELPPGVRPPAGLGESELHLARRLILRTPRRTAGGEDAAVLLGAALR
AAKSVRATRRLTGPLRVVIDPVRVG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgcccgtcgcccgggtgctgcccctgctggggatgccgcacctcgaccggctc
ttcgactactcggtctctgaggagctggacaccaccgcccggcctggcgtccgcgtccgc
atccggttcgccggacgcctggtggatgccgtcgtcatcgaacggcggcggagcaccgac
cacgagggcaggttgagtgccctgcagcgcgtcatcagccccgaggtcgtcgtcccaccg
ggactgtgggacctggtcaacctgctcgccgaccgctacggcggggtgcggtccgacatc
ctccgcgccgccgtaccctcccggcacgccagtgcggagaaggccgggcttttcggcaac
ggggtggactggccggaactctacggtgccctcgaacctgtcgaggacctcaccaccgcc
gcgcgggacactgccctgtcaggctggtccgcctaccggcacgccgacagcctgctggag
gccgtactggccggacgttcggcgcgggcgtcctggctgtggacaccgggggaggactgg
gcggcgcgcgtcgccgagatggccgccaccgtcgcctggtcggggggaggcgtcctgctg
gtcgtccccgaccagcgtgacgtcgaccgactctccgccgagctgcggaacttcctgtcc
gctgcgcagatcaccgaactcaccgcctccgtcggtccggccgcacgctaccgtcgctac
ctcgccgtgctcgccgggcaggggcgcgtcatcgtcggtacccggtccgcggcgaccgtt
ccggttcccgggctccggctgatcatgctcaccggggaggcggacgactccctcgtcgat
ccccgggctccgtacctccacgcccgcgacgtgctcaaggtacgggcggagcaggaaggc
tgcggcttcatcgtcggcggcgcccaccgcagtgccgaggtgcagcagtgggtcgaggaa
ggcttctgtcccacactgcgcgccgatccggacgtcctgcgtgcccggatgccgtggatc
cacgccctcgacgacaaccacgacgcccaccagtccttcacccgtatcccgaccgccggc
tacaaggcgatccgtcaggcatccgacaacggactacccgctctggtgcaggtgccgcga
cgggggtacgcaccctccctggcctgcaaggactgccgcactcccgcccggtgccgccgg
tgcaacgggccgctggaactgccgcccggagaccaggggcgtgcaggtgccgccgaaccc
cggtgccggtggtgcggagccccggaaggcaggttcacctgtccaggctgtggcgggcac
gcggtacggatgaccgtcatcgggtccgaccgcaccgccgaggagctcggtcgggcgttc
ccgggcgtgcccgtggtgctgtccggcggctcccaggtcagggacaccgtccccgacggc
ccgcgcatcgtggtcgccaccccgggcgcggaaccggtcgcggagtccggctacggtgcg
gcggtcctgctcgacccctggctcaccctgggccgggccgacctgcgggcctccgagggg
gccctgcgacagtggatggaggcgtcctgcctggtcgtgccgcgggagcagggtggccag
gtcgtcctggtcgcccgcaccgaccttcccgaggcccaggccctgatccgctgggacccc
gagggcgcggcggccacggaactggcacagcggcgctccgccggattcccgccggccacg
gtgctcgtcgccgtcgacggcaccaccgagaccgtcaaagagctccaggagatactcgtc
gtccctgaggagctcgaccgcctcgaggtcctcggaccggtggaactgccgccgggggtc
cgcccgccggcgggactgggagagtcggaactgcatctggcacgtcggctgatcctgcgg
acaccgcgccgtaccgccggaggtgaggacgccgccgtgctgctcggtgcggcacttcgt
gcggcgaaatccgtccgcgccacacggcgtctcaccggacccctgcgcgtcgtcatcgac
ccggtacgcgtgggatag
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