Corynebacterium variabile: CVAR_1545
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Entry
CVAR_1545 CDS
T01594
Symbol
ruvB
Name
(GenBank) Holliday junction resolvasome helicase subunit B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVAR_1545 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_1545 (ruvB)
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVAR_1545 (ruvB)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVAR_1545 (ruvB)
RecFOR pathway proteins
CVAR_1545 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
AAA_16
Mg_chelatase
RNA_helicase
nSTAND3
AAA_3
Sigma54_activ_2
NTPase_1
MCM
AAA_25
ResIII
IstB_IS21
Rad17
AAA_18
AAA_19
GGDEF_2
NACHT
Zeta_toxin
AAA_33
ABC_tran
DnaB_C
Resolvase
AAA_17
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEK36899
UniProt:
G0HE32
LinkDB
All DBs
Position
complement(1773043..1774140)
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AA seq
365 aa
AA seq
DB search
MGDVERTEFDLSGAGSPGPARPDRPDRTDRTDRGNDALSDRMLPGDDDSELSLRPRSLTE
FIGQPKVRGQLDLVLGGARARGVVPDHVLLAGPPGLGKTTMAMIIAQELSTSLRMTSGPA
LERAGDLAAMLSNLMEGDVLFIDEIHRMARPAEEMLYMAMEDFRIDVIVGKGPGATSIPI
ELPPFTLVGATTRAGMLTGPLRDRFGFTAQMEFYDTADLTAVVTRAASILGVDITGDAAA
EIASRSRGTPRIANRLLRRVRDYADVRADGAITVDVARAALLVFDVDELGLDRLDRAVLG
SLVKTHGGGPVGVNTLAVAVGEESTTVEEVCEPYLVRAGMIARTSRGRVATPSAWRHLGL
EPPEV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtcgaacgtaccgaattcgatctgagcggtgccgggagcccaggtccggca
cggccagaccggcccgaccgtacggaccgtacggaccggggcaatgacgcgctctcggac
cggatgctgcccggggacgacgactccgaactctcactgcgaccccggtcactgaccgag
ttcatcggtcagccgaaggtccgcgggcaactcgacctcgttctcggcggtgcgagggcc
cgcggtgtggtccctgaccatgtcctgctcgccggtccgcccgggctgggcaagacgacg
atggcgatgatcatcgcccaggaactcagcacctcactgcgcatgacctccgggcccgcc
ctggagcgcgccggcgatctcgccgcgatgctctcgaacctcatggagggcgatgtgctc
ttcatcgacgagatccaccggatggcccgaccggccgaagagatgctctacatggccatg
gaggacttccggatcgacgtcatcgtcggcaagggtccgggcgccacctccatccccatc
gaactgccgccgttcaccctcgtcggtgcgacgacgcgggccggcatgctcacaggcccg
ctgcgcgaccgtttcggcttcaccgcccagatggagttctacgacaccgccgacctcacc
gccgtggtcacgcgcgccgcgtccattctcggggtcgacatcaccggcgacgccgctgcg
gagatcgcgtcacgctcccgggggacgccgcgcatcgccaaccgcctgctgcgccgcgtc
cgtgactatgccgatgtccgcgccgacggagcgatcacggtggacgtggcccgggcggcc
ctcctggtcttcgacgtggatgaactcggtctcgaccggctggaccgcgcggtcctcggc
tccctggtgaagacccacggcggtgggccggtgggggtgaacaccctcgctgtcgcggtg
ggggaggaatccaccaccgtcgaggaggtgtgcgaaccctacctggtgcgtgccggcatg
atcgcccggacctcccgcgggcgcgtcgccactccgtctgcctggcgtcatctcggactc
gaaccaccggaagtgtga
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