Corynebacterium variabile: CVAR_1633
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Entry
CVAR_1633 CDS
T01594
Symbol
gpsI
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cva
Corynebacterium variabile
Pathway
cva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVAR_1633 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cva03019
]
CVAR_1633 (gpsI)
03016 Transfer RNA biogenesis [BR:
cva03016
]
CVAR_1633 (gpsI)
Enzymes [BR:
cva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CVAR_1633 (gpsI)
Messenger RNA biogenesis [BR:
cva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVAR_1633 (gpsI)
Transfer RNA biogenesis [BR:
cva03016
]
Prokaryotic type
tRNA degradation factors
CVAR_1633 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
OB_cyt-4
KH_PNO1_2nd
KH_NusA_1st
Coatomer_g_Cpla
Motif
Other DBs
NCBI-ProteinID:
AEK36987
UniProt:
G0HEK1
LinkDB
All DBs
Position
complement(1864124..1866412)
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AA seq
762 aa
AA seq
DB search
MTTKNTKKNTPAPTHTAELIDPDSGVWESNATIDNGDFGTRTLTFETGLLARQADGSVTA
YLDDDTMLLSTTTASKHPRENLDFFPLTVDVEERMYAAGRIPGSFFRREGRPGTEAILAC
RLIDRPLRPTFAKGLRNEVQVVVTVLSMDPEDMYDVVAINAASASTQLSGLPVSGPVGGV
RMALVVDEAHADGQWVAFPTREQHEQAVFELVVAGRVSEVKKPRGRRKAVPGDDVVVMMV
EAGATENVVERIAEGAPAPTEKIVAEGIEAARPFIAELCGAQAALVDAVEASHAREFELF
PAFGEDVYASVESESAEALRGIMAIADKQERDDALSANMDAAVDALGEQFEGRESEIRNA
HNEVSRQIVRERILTDGFRIDGRDTTAIRDLGVMIDLVPRAHGSALFERGETQILGVTTL
DMLKMEQQIDSLGPVTSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVVP
SREVFPYTIRQVSEALGSNGSTSMGSVCASTLSMYNAGVPLKAPVAGIAMGLVTGEVDGK
DTYVTLTDILGAEDAFGDMDFKVAGTADFITALQLDTKVDGIPAKVLAEALSQARGARLE
ILSTMAEAIEGPEEMSDFAPRITTVKIPQNKIGELIGPKGKTINQITEETGANISIEDDG
TVFVSAAAGKAAEAALDKVNSIANPQLPKVGDRFLGTVVKTTAFGAFISLLPGRDGLLHI
SNLGGDRRVEKVEDEVSVGDSLEVEIADIDNRGKISLILVED
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagaacaccaagaaaaacaccccggcgcccacccacaccgccgaactgatc
gacccggactccggagtctgggaatccaacgccaccatcgacaacggcgacttcggcacc
cgcaccctcaccttcgagaccgggctgctcgcccgccaggccgacggttccgtcaccgcc
tacctcgacgatgacacgatgctgctgtcgaccaccaccgcctccaagcacccgcgcgag
aacctcgacttcttccccctcaccgtggacgtcgaggagcgcatgtacgccgccggccgc
atccccggcagcttcttccgccgtgagggacgtccgggcaccgaggccatcctcgcctgc
cgtctcatcgaccgcccgctgcgtccgaccttcgccaagggcctgcgcaacgaggtccag
gtcgtcgtgactgtcctgtccatggacccggaggacatgtacgacgtcgtggccatcaac
gccgcgtccgcctccacccagctctctggcctgccggtctccggcccggtcggtggcgtc
cgcatggccctcgtcgtcgacgaggcacacgccgacggccagtgggtcgccttcccgacc
cgcgagcagcacgagcaggccgttttcgagctggtcgtcgctggccgtgtctccgaggtc
aagaagccgcgcggtcgccgcaaggccgtcccgggcgacgacgtcgtcgtcatgatggtc
gaggccggtgcgaccgagaacgtcgtcgagcgcatcgccgagggtgccccggccccgacc
gagaagatcgtcgccgagggtatcgaggccgcccgcccgttcatcgccgagctctgtggc
gcccaggccgccctcgtcgacgccgtcgaggcatcccacgcacgcgagttcgagctcttc
ccggctttcggcgaagacgtctacgcctccgtcgagtccgagtccgccgaggccctgcgc
ggcatcatggcgatcgccgacaagcaggagcgcgatgacgccctgtccgcgaacatggac
gccgccgtcgacgcactcggcgagcagttcgagggccgcgagtccgagatccgcaacgcc
cacaacgaggtctcccgtcagatcgtccgcgagcgcatcctcaccgacggcttccgcatc
gacggccgcgacaccaccgcgatccgtgacctcggcgtcatgatcgacctggtgccccgc
gcccacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
gacatgctcaagatggagcagcagatcgacagcctcggcccggtgacctccaagcgctat
atccaccactacaacttcccgccgtactccaccggtgagaccggccgcgtcggctccccg
aagcgtcgcgagatcggccacggcgccctcgccgagcgcgccctgctcccggtcgtgccg
tcccgcgaagtcttcccgtacacgatccgtcaggtctccgaggccctcggttccaacggc
tccacctccatgggctcggtctgcgcgtccaccctgtcgatgtacaacgcaggcgtgccg
ctgaaggccccggtcgcgggtatcgccatgggtctggtcaccggcgaggtcgacggcaag
gacacctacgtcaccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggtaccgccgacttcatcaccgccctgcagctcgataccaaggtcgac
ggcatccccgccaaggtcctcgccgaggccctgtcccaggcccgcggcgcgcgcctggag
atcctgtccaccatggccgaggccatcgagggcccggaggagatgagcgacttcgcgccg
cgcatcaccaccgtgaagatcccgcagaacaagatcggtgagctcatcgggccgaagggc
aagacgatcaaccagatcaccgaggagaccggcgccaacatctccatcgaggacgacggc
accgtcttcgtctccgccgccgccggcaaggccgccgaggcagccctcgacaaggtgaac
tccatcgccaacccgcagctgccgaaggtcggtgaccgtttcctcggcaccgtcgtgaag
accaccgccttcggtgccttcatctctctgctgccgggccgcgacggactgctgcacatc
tccaacctcggcggcgaccgccgggtggagaaggtcgaggacgaggtctccgtcggagac
tccctcgaggtcgagatcgcggacatcgacaaccgcggcaagatctccctcatcctcgtc
gaggactag
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