Corynebacterium variabile: CVAR_1636
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Entry
CVAR_1636 CDS
T01594
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cva
Corynebacterium variabile
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cva03016
]
CVAR_1636
Enzymes [BR:
cva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CVAR_1636
Transfer RNA biogenesis [BR:
cva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVAR_1636
Prokaryotic type
CVAR_1636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEK36990
UniProt:
G0HEK4
LinkDB
All DBs
Position
1868147..1869121
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AA seq
324 aa
AA seq
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MPRTDPRPVLDRSGLVVVDKPAGMTSHDVVSRLRRIFGTRRVGHSGTLDPMATGVLVVGI
ERGTRFLAHVVTHDKRYAATVRLGASTLTDDAEGEVLTTADAATLASLTEQQVRDAFARQ
TGEIMQRPSSVSSVKINGRRAHELVREGVDVVLPERPVTVFSLDVDAVRISEGSVEADIR
VHCSSGTYIRSIARDVGAELEVGGHLTALRRTSAGPFDIAEARTLDELNRQKDAVLASSP
EGTDPRGVSPELSLSLDGAMVRCFPVRNVTEDQGSALALGKWLEPVGDREVVAAVTPSGH
AVALLEEKGKRAASVFVARPAGME
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaacggacccccgccctgtactcgaccgctccggcctcgtcgtcgtcgacaag
ccggccggaatgaccagccacgatgtggtctcgcgcctgcgccggatcttcggcacccgt
cgggtcggccattccggaaccctcgatccgatggccaccggagtgctcgtcgtcggcatc
gagcgcggcacccgcttcctcgcccacgtcgtcacccacgacaagcggtatgcggcgacg
gtccggctcggcgcgtccaccctcaccgacgacgccgagggcgaggtcctcaccaccgcg
gacgccgcgacgctggcgtccctcaccgagcagcaggtgcgggacgcgttcgcccgccag
accggggagatcatgcagcggccgagttcggtgagttcggtgaagatcaacggtcgccgc
gcccatgagctggtgcgcgagggggtggacgtggtcctgccggagcggccggtcacggtg
ttctccctcgacgtggacgccgtgcgcatcagcgaggggtcggtcgaggcggacatccgg
gtgcactgttcctccggcacctacatccgctcgatcgcccgtgatgtcggggcggagctg
gaggtcggaggacatctgaccgcgctgcgtcggacctcggccggcccgttcgacatcgcg
gaagcacgcacgctcgacgagctcaacaggcagaaggacgcggtactggcgtcctccccg
gaagggacggacccgcggggcgtctccccggagctctcactgtcgctcgacggggcgatg
gtgcggtgcttcccggtccggaacgtgaccgaggaccagggcagtgccctggccctcgga
aaatggctggaaccggtgggcgaccgtgaggtggtcgcagcggtcaccccctcaggtcac
gccgtggcgctgctggaggagaaggggaaacgggcggcgagtgtgttcgtcgcccgcccc
gccgggatggagtga
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