Corynebacterium variabile: CVAR_1733
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Entry
CVAR_1733 CDS
T01594
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cva
Corynebacterium variabile
Pathway
cva03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CVAR_1733 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cva03019
]
CVAR_1733 (rnc)
03009 Ribosome biogenesis [BR:
cva03009
]
CVAR_1733 (rnc)
03036 Chromosome and associated proteins [BR:
cva03036
]
CVAR_1733 (rnc)
Enzymes [BR:
cva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CVAR_1733 (rnc)
Messenger RNA biogenesis [BR:
cva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CVAR_1733 (rnc)
Ribosome biogenesis [BR:
cva03009
]
Eukaryotic type
90S particles
RNase
CVAR_1733 (rnc)
Prokaryotic type
rRNA processing factors
CVAR_1733 (rnc)
Chromosome and associated proteins [BR:
cva03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CVAR_1733 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AEK37085
UniProt:
G0HBH2
LinkDB
All DBs
Position
complement(1996993..1997736)
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AA seq
247 aa
AA seq
DB search
MSRKRRLTGEAALEAAFSKTDHTPLLEAWGVELSDGMLRLALSHRSFANENGNLPNNERL
EFLGDALLGLSVAEQLYRQFPDRSESDISKMRAGVVNMYALAEVARELGMGGNILLGRGE
EMTGGADKHSILADSVEAMLGAIYLECGFEVARATVLRIFERKITTAPSTGLTMDWKTVL
LEKMSDLKISGDPVYASDVKGPDHDQTFSATVSFDGEARGTGTGHTKKEAEHHAAREAYR
TLSGLNG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaaacgtcgcctgaccggagaagccgcactggaggccgccttctcgaagacc
gaccacaccccactgctcgaggcgtggggcgtggaactgtccgacggtatgctgcgtctg
gccctgtcgcaccgttccttcgccaacgagaacggcaacctgccgaacaatgagcggctc
gagttcctcggggacgccctcctcggcctctccgtcgccgagcagctctaccggcagttc
ccggaccgctccgagtcggacatctcgaagatgcgtgccggtgtggtcaacatgtacgcc
ctggccgaggtcgcccgggagctggggatgggtgggaacatcctgctcggccgcggtgag
gagatgaccggcggtgccgacaagcactccatcctcgcggactcggtggaggccatgctc
ggtgcgatctacctggagtgcggcttcgaggtcgcccgtgccacggtgctgcgtatcttc
gagcgcaagatcaccacggccccgtccaccggtctcaccatggactggaagaccgtgctg
ctggagaagatgtccgacctgaagatctccggggacccggtgtacgcgtccgacgtcaag
ggaccggaccacgaccagaccttcagtgcgaccgtctccttcgacggtgaggcgcgcggt
acggggaccgggcacacgaagaaggaggcggagcaccacgccgcccgtgaggcctaccgc
acgctcagtggcctgaacggctga
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integrated database retrieval system