Corynebacterium variabile: CVAR_1804
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Entry
CVAR_1804 CDS
T01594
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cva
Corynebacterium variabile
Pathway
cva03030
DNA replication
cva03430
Mismatch repair
cva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVAR_1804
03430 Mismatch repair
CVAR_1804
03440 Homologous recombination
CVAR_1804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cva03032
]
CVAR_1804
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_1804
Enzymes [BR:
cva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVAR_1804
DNA replication proteins [BR:
cva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVAR_1804
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVAR_1804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEK37156
UniProt:
G0HEU4
LinkDB
All DBs
Position
complement(2074304..2074990)
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AA seq
228 aa
AA seq
DB search
MTTATRFDPSHMLSFDLETTGPDPLTARIVTSALITINGSHRDDLEILADPGIPIPEGAT
AVHGITTEYAREHGRPHDEVLAETIERIRRGWSEGATLIIYNAAYDLTVLRTLEPTFTVD
GPVFDPLVVDKAKDRYRKGGRRLTQVCEHYGVTLDNAHEASADAVAAARVAWKLTRAYPE
VVEMTADELMLKQATWNYEDKSHLKEYFISKGQTAKAETVNTSWPLQA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcgacgcgcttcgatccctcccacatgctcagcttcgacctggagaccacc
ggcccggaccccctgaccgcacggatcgtgaccagcgcgctgatcaccatcaacggttcc
caccgtgatgacctggagatcctcgccgaccccgggatcccgatcccggagggtgccacc
gcagtccacggcatcaccaccgagtacgcccgggagcacgggcgtccccacgacgaggtt
ctcgccgagaccatcgaacgcatccgccgcggttggtcggagggggcgacgctcatcatc
tacaacgctgcctacgatctcaccgtcctgcggaccctggagcccaccttcaccgtcgac
ggtcccgtcttcgacccacttgtcgtcgacaaggcgaaggaccggtaccgcaagggagga
cgccgtctcacgcaggtctgcgagcactacggtgtcaccctcgacaacgcacacgaggcc
tcggcggacgcggtggcggccgcccgcgtcgcctggaaactcacccgtgcctaccccgag
gtcgtcgagatgaccgccgatgagctcatgctcaagcaggcgacctggaactacgaggac
aagagtcatctcaaggagtacttcatctccaaggggcagaccgccaaggccgagaccgtt
aacacgtcctggccactgcaggcgtga
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