Corynebacterium variabile: CVAR_1846
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Entry
CVAR_1846 CDS
T01594
Symbol
helZ
Name
(GenBank) ATP-dependent helicase
Organism
cva
Corynebacterium variabile
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AEK37197
UniProt:
G0HEY5
LinkDB
All DBs
Position
complement(2120818..2124126)
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AA seq
1102 aa
AA seq
DB search
MDGVEQWFGTGRAEAVRSPWYTRRVTEHRVHLLWLAGRGLHLWVERVEGHAVVVDSATLG
PDDLAAPLLELVKSRALRRRDGMRVATPKGQVREISLYTQAWTPEQALTVLGTLSAYLRG
GGDISQLSAETVWLVRLYELLLEIVDTGRVMMKLHFADGQWFPVWCVSSSGVHNRILREF
QASCPVVLTLNGGDDVLLRAADELVHWMCVARLQERSAATGTVFDNHFVAALVSGEADRR
LTPVVADGLAAWRRSATENSTRLVLMLQEPQGAAADDGDDDDSDTGAEPVDPEARRWRLG
VRLSVDDAPAAEIPASEAGDREKRVLRPGLDAAYRAWPPLRETATAVEGWLRTGVWFPES
AALTGRPAEDRVLSLALTMADVEALLSEGVAALIMAGVDVLVPRGWSTVRPAVKVRISPV
GAGPAEGRMGMEQVLSFDWDISVDGEQLSPLQKHDLLTSARSVVQVKGRYVRLDGDSLSR
ARSYFRTVTEAQQAAEKDRKDAARTDDPHPLVSLGDLLSAELASQDRTWNADEDLEIDAE
GWVGRMLAAQHPREGDGEMPALTPPERVEPPTSLTVTLRDHQQRGLNWLVWMFRHRLGAV
LADDMGLGKTLQVLALLAWEREHGESTGPTLVVAPTSVLEAWNSEVARHVPSLRVLVDHG
SGKVPEEQFPAAAEAVDLVLTTYGTVGRNPARYAGLRWGRVVADEAQNIKNPGTAQSRAV
RAVPADHRIALSGTPVENRLSELHTLMDFCNPGLLGSAKAFHNAIGSHIERDREPEDVER
LHRLVDPFILRREKTDASLDLGLPEKREYIDSVTMTAEQAALYQAYAADVEDRLANSRSD
RRSGLVLTALTHFKEICNHPAHFSGDGSGIRKDGRHRSGKVERLYRIVAEALEQDRRVLV
FTQFPSFGRMLAPDMEEVFGIEVPMLHGGLNRKARVDLVNRFQSENGPKVMILSTRAGGT
GITLTRASVVIHIDRWWNPAVEDQATDRAYRIGQGQDVRVHKLIAVGTLDERINDILGAK
RDLAGDVVSAGESWLTRMDDASLKDLWRLNTSTSDRRLGTGGAEGEAALQEAMDRIADNW
AEFQVGLLEKYPAKDREEDDCE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtggacggggtcgaacagtggttcggcacgggtagggcagaggctgtccggtccccgtgg
tacacaaggagagtgactgaacaccgggtacatcttctgtggctcgccggccggggtctt
cacctctgggttgagcgggtcgaggggcacgccgtcgtggtcgacagtgccacgctcggc
ccggatgacctggctgcgccgctgctcgaactggtgaagagccgggcgctgcggcgtcgc
gacgggatgagggtggcgacgccgaagggacaggtccgtgagatctccctctacacccag
gcgtggacgcctgagcaggcgctcaccgtgctcggaacactctcggcgtatctgcgtggg
ggtggtgacatctcccagctcagcgcggagacggtgtggctcgtgcggctgtacgaactc
ctcctggagatcgtggacaccggacgtgtgatgatgaagctccatttcgccgacggtcag
tggttcccggtgtggtgcgtctcctcctccggggtgcacaaccggatcctccgggagttc
caggcgtcctgcccggtggtgctgacgctcaacggcggggatgatgtcctgctgcgcgcc
gccgatgagctggtccactggatgtgtgtcgcccggctgcaggagcggtccgcagccacc
ggcacggtcttcgacaaccacttcgtcgccgcgctggtgtccggcgaggcagaccgccgc
ctcactccggtcgtcgctgacgggctggcggcatggcgccgctcggccaccgagaactcc
acccggctcgtcctcatgctgcaggagccccagggtgcggcggcggacgacggcgacgac
gatgactcagacaccggggcagaaccggttgatccggaggcgcgtcgctggcgtctcggc
gtccgtctgtcggtggatgacgccccggccgccgagatcccggcgtccgaggcgggggac
agggagaagcgggtgctgcgtccggggttggacgccgcctaccgggcgtggccgccgctg
cgtgagacggccacggcggtggaagggtggttacgcaccggggtgtggttcccggagtcg
gcggcactgaccgggcgtcctgccgaggaccgcgtgctgtccctggcgctgaccatggcg
gatgtcgaggcactgctgtccgagggggtggcggcgctgatcatggccggtgtcgacgtg
ctcgtaccgcgtggctggtccacggtgcgtccggcggtgaaggttcggatctcgccggtc
ggcgccgggccggcggagggtcgcatgggtatggagcaggtgctgtccttcgactgggac
atctcggtcgacggcgaacagctcagtccgctgcagaagcatgacctgctcacctcggca
cgctccgtcgtacaggtcaagggccggtacgtgcgcctagacggggactccctgtctcgg
gcgcgcagctacttccgcacggtgacggaggcgcagcaggcggcggagaaggacaggaag
gacgcagcgcgtaccgacgacccccatccgctggtgtcgctcggcgacctgctgtccgcc
gaactggcctcgcaggaccgaacctggaacgccgacgaggacctcgagatcgacgccgag
ggctgggtcggccggatgctcgctgcccagcacccgcgtgaaggtgacggcgagatgccg
gccctcactccgccggagcgggtggagccgccgacctccctgacggtcacgctgcgcgac
caccagcagcggggtctcaactggctggtgtggatgttccgccaccggctcggtgcggtt
ctcgccgatgacatgggcctgggtaagactctgcaggtcctcgccctgctggcctgggaa
cgcgagcacggtgagtcgaccggtcccacactcgtcgtggccccgacctcggtactggag
gcatggaactcggaggtcgcccggcatgtgccgtcgctgcgtgtcctggtggaccacggc
tcgggaaaggtgccggaggagcagttcccggccgcggccgaggcagtggatctggtgctg
acgacctacgggaccgtgggacgcaacccggcccgctacgccggtctgcggtggggtcgg
gtggtcgccgatgaggcgcagaacatcaagaacccgggcacggcgcagtcgagggcggtc
cgggctgtcccggccgaccaccgcatcgcgctcagcggcaccccggtggagaaccggctg
tcagagctgcacaccctcatggacttctgtaatcccgggctgctgggctcggcgaaggcc
ttccacaacgccatcggttcccacatcgagcgggaccgggaaccggaggacgtcgagcgg
ctccaccggctcgtcgacccgttcatcctgcggagggagaagacggatgcgtccctggat
ctggggctgccggagaagcgcgagtacatcgactcggtcaccatgaccgcggagcaggcg
gcgctgtaccaggcgtacgccgcggacgtcgaggacaggttggccaacagccgcagtgac
cgacgtagtggtctggtgctcaccgcgctgacgcatttcaaggagatctgcaatcacccg
gcgcatttcagtggcgacgggtccgggatccgtaaagacggccgtcaccgctccggcaag
gtcgaacggctctaccggatcgtcgccgaggcactcgagcaggaccgtcgggtgctggtg
ttcacccagttcccgtcgttcggacgcatgctcgccccagacatggaggaggtgttcggc
atcgaggtgccgatgctccacggtggactgaacaggaaggcgcgtgtggacctggtgaac
cggttccagtcggagaacgggccgaaggtgatgatcctgtcgaccagggccggtggcacc
ggcatcacgctgacccgggccagcgtggtcatccacatcgaccgttggtggaatccggcg
gtggaggaccaggccaccgaccgggcctaccggatcggccaggggcaggacgtccgcgtt
cacaagctcatcgccgtgggtactctcgacgagaggatcaacgacatcctcggtgccaag
cgcgacctcgccggagacgtggtcagtgccggagaaagctggctgacgaggatggacgat
gcgtccttgaaggacctgtggcggctgaacacctccacctccgaccgccgactcggtacc
ggcggtgccgaaggtgaggcggcgctgcaggaggcgatggacaggatcgcggacaactgg
gccgagttccaggtgggtctgctggagaagtacccggcgaaggacagagaggaggacgac
tgtgagtga
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