Corynebacterium variabile: CVAR_1918
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Entry
CVAR_1918 CDS
T01594
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cva
Corynebacterium variabile
Pathway
cva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CVAR_1918 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_1918 (xseA)
Enzymes [BR:
cva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CVAR_1918 (xseA)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CVAR_1918 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AEK37271
UniProt:
G0HFL8
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All DBs
Position
2200181..2201503
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AA seq
440 aa
AA seq
DB search
MSESPGPTTADSPWHVHTVNEKVKGWIERLGHLWVEGQITQLNMKPSWKLSYITLRDVSQ
EQSIKLTCSTQTLRNLPVPVKNGDRVVVYGKPAFYAVRGEFSLWVSQIRPVGVGEMLARI
EELKRALAAEGLFDPRLKRPLPFLPNRIGLITGRESAAEHDVLSVSRDRWPVVRFETINT
PVQGSQAVPAILDALRTLEADPRVDVIIVARGGGSVEDLLPFSEEALARAVSSMTTPVVS
AIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVAAELSLIAELRGRAAGALRSWVANEQR
GLASVRSRPVLADPMLPITRAREVVEDARSRNDRALGVLVRTARHQVESLRARVNALGPS
QTLRRGYAVVQVVPRDHTPPQVITTVDDVEPGSQLRIRVLDGSVTAAAMGVQKSPTNTQT
APDTETDPETDTETEESTDE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccccgggtcccaccacagcggactccccgtggcacgtccacaccgtcaac
gagaaggtcaagggctggatcgagcggctcggtcatctctgggtggaggggcagatcacg
cagctcaacatgaagccgtcgtggaagctctcgtacatcaccctgcgcgacgtctcccag
gaacagtcgataaagctgacctgctccacacagacactgcgtaatcttcccgtgccggtg
aagaacggcgaccgcgtcgtcgtctacggcaagcccgccttctacgccgttcgcggcgaa
ttctccctctgggtctcacagatccgcccggtgggtgtcggcgagatgctcgccaggatc
gaggaactcaaacgcgcactcgccgccgagggcctgttcgaccccaggctcaagcgccct
ctccccttcctgccgaaccgcatcggtctgatcaccgggcgtgaatccgcggccgagcat
gacgtcctctccgtgtcccgcgaccgctggccggtggtgaggttcgagacgatcaacaca
ccggtccagggttcccaggcggtcccggcgatcctcgatgccctccgcaccctggaggcc
gatccccgggtggacgtcatcatcgtcgcccgcgggggcggctccgtcgaggacctcctc
cccttctccgaggaggcgctggcgcgcgcggtcagttccatgacgaccccggtggtctcc
gcgatcggccatgagccggacaacccggtcctcgacaacgtcgccgacctgcgtgccgcc
acgccgacggacgccgccaagcgggtcgtccccgatgtcgccgccgagctctccctcatc
gcagagctgcggggacgcgccgccggcgcactgcgctcctgggtcgccaatgagcagcgg
gggttggcctcggtccgctcccggccggttctggccgaccctatgctgccgatcacccgg
gcacgggaggtcgtggaggacgcccgctcccgcaacgaccgcgccctcggcgtcctcgtg
cggaccgcccggcaccaggtcgagtccctgcgggcccgggtcaacgcactgggcccctcg
cagaccctcagacgcggctacgcggtggtgcaggtcgtccccagagaccacaccccaccc
caggtcatcaccactgtcgacgacgtggaaccggggtcgcagctgcggatccgcgtccta
gacgggtccgtgaccgcggcagccatgggggtacagaagtccccgacgaacacacagaca
gcaccggatacagagaccgatccagagaccgatacagagaccgaggagtccaccgatgag
tga
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