Corynebacterium variabile: CVAR_1937
Help
Entry
CVAR_1937 CDS
T01594
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cva
Corynebacterium variabile
Pathway
cva00260
Glycine, serine and threonine metabolism
cva00460
Cyanoamino acid metabolism
cva00630
Glyoxylate and dicarboxylate metabolism
cva00670
One carbon pool by folate
cva00680
Methane metabolism
cva01100
Metabolic pathways
cva01110
Biosynthesis of secondary metabolites
cva01120
Microbial metabolism in diverse environments
cva01200
Carbon metabolism
cva01230
Biosynthesis of amino acids
cva01240
Biosynthesis of cofactors
cva04981
Folate transport and metabolism
Module
cva_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CVAR_1937 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CVAR_1937 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CVAR_1937 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CVAR_1937 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CVAR_1937 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CVAR_1937 (glyA)
Enzymes [BR:
cva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CVAR_1937 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AEK37290
UniProt:
G0HFN7
LinkDB
All DBs
Position
complement(2219858..2221150)
Genome browser
AA seq
430 aa
AA seq
DB search
MTDTTQHNLPLGELDPEVASAIAGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAE
GYPGRRYYGGCENVDIIEDLARDRAKAVFGAEFANVQPHSGAQANAAVLMSLANPGDKIM
GLSLAHGGHLTHGMKLNFSGKLYEVAAYEVDPETMRLDMDKVREQAIAEKPQVIIGGWSA
YPRHQDFEAFRSIADEVDAKLWVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGPRS
GMILAKQEYAKKINSSVFPGQQGGPLMHAVAAKAVSMKIAQTDDFRDRQARTLEGAKILA
ERLTGQDTVDAGVQVLTGGTDVHLVLVDLRNSELNGQEAEDLLHEVGITVNRNAVPFDPR
PPMVTSGLRIGTPALASRGLDAAAFTEVADIIGTALAQGKNADTAALRARVDKVAADFPL
YPGLEDWKLV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacccagcacaacctccccctcggggaacttgatccggaggtggcctcc
gccatcgccggtgagctttcccgtcagcgggacaccctcgagatgatcgcgagtgagaac
ttcgtcccgcgtgccgttctccaggcccagggctccgtcctcaccaacaagtacgccgag
ggctacccgggtcgccgctactacggcggttgcgagaacgtcgacatcatcgaggacctc
gcccgcgaccgcgcgaaggctgtcttcggtgccgagttcgccaacgtccagccgcactcc
ggtgcgcaggcgaacgccgccgtgctgatgtccctggccaacccgggcgacaagatcatg
ggtctgtccctggcacacggtggtcacctcacccacggcatgaagctgaacttctcgggc
aagctctacgaggtcgccgcctacgaggtcgatccggagaccatgcgtctggacatggac
aaggtccgtgagcaggccatcgccgagaagccgcaggtcatcatcggtgggtggtccgcc
tacccgcgtcaccaggatttcgaggccttccgctccatcgccgacgaggtcgacgcgaag
ctgtgggtcgacatggcacacttcgccggcctggtcgccgccggtctgcacccgtcgccg
gtgccgcacgccgatgtcgtctccaccacggtccacaagaccctcggtggcccgcgctcc
ggcatgatcctggcgaagcaggagtacgccaagaagatcaactcctccgtcttccccggt
cagcagggtggcccgctgatgcacgccgtcgccgccaaggccgtctccatgaagatcgcc
cagaccgacgacttccgtgaccgtcaggcccgcaccctcgagggcgcgaagatcctcgcc
gagcggctcaccggccaggacaccgtggatgccggcgtgcaggtgctcaccggcggcacc
gatgtgcacctggtgctcgtcgacctgcgtaactccgagctcaacggccaggaggccgag
gacctgcttcacgaggtcggcatcaccgtcaaccgcaacgccgtgcccttcgacccgcgt
ccgccgatggtcacctcgggtctgcgcatcggtaccccggccctcgcctcccgtggcctg
gacgccgccgccttcaccgaggtcgcggacatcatcggtaccgccctggcccaggggaag
aacgcagacaccgccgcactgcgcgcccgggtcgacaaggttgccgcggacttcccgctg
tacccgggtctcgaggactggaagctggtctag
DBGET
integrated database retrieval system