Corynebacterium variabile: CVAR_2146
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Entry
CVAR_2146 CDS
T01594
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva03420
Nucleotide excision repair
cva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVAR_2146
03430 Mismatch repair
CVAR_2146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_2146
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVAR_2146
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVAR_2146
MMR (mismatch excision repair)
Other MMR factors
CVAR_2146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEK37496
UniProt:
G0HF44
LinkDB
All DBs
Position
complement(2432757..2434889)
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AA seq
710 aa
AA seq
DB search
MHGANSRLCQLNLDALDPEQLRAATAPRGPVAIIAGAGTGKTRTITHRIAHLVAGGFVNP
DHVLAVTFTTRAAAELRERLTMMGVARVQAKTFHAAARGQLRYFWPRFVGDTPWQLLDSK
FPFVARACRANGVATDKTTLSDLLGEIEWAKSSLIAPEDYPAHIGPDRRDCPVAPEQFVR
IFEGYENSKVTGEGVYLDFDDLLQSMAGAIEADPGVADEFRSRYRTFVVDEYQDVTPLQQ
RLLDAWLGDRDDLTVVGDANQTIYSFNGATPEHLLRFSSRYPEATTVRLFRDYRSTPQVV
DLANKVIGRATGRAAGTRLELEGQRAPGPAPEFTEYSDEAAEATGVAERISALIASGVSP
SEIAVLYRINAQSAALEYALDAAGISYQVKGGEGFFQRPEIRQGVNALTDAARRLSRRDP
GAEDQPRPTPEQLVNQVRAALVPVGLTPTEPTGAQDRARWQSLGALVDLAEELSTATPGL
DMSNLLGILRERAQSKNPPKVEGVTLASIHAAKGLEWDAVFLIGLVDGTVPIRHALKGTH
SEDAIEEERRLLYVGVTRAREVLELSWAQARQPGGKASRRRTRFLDGLVPWEKADAASGT
GKTSVKGAPKNACAVCGARLTTPEQRILGRCDAHAEDGDQVLVTELRSWRTTLAKERDVP
AYVVMSDATLKAVALKAPTSARDLLKVPGIGPAKVEQFGEDILGIVTNYS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggcgccaactcccggctctgccagctcaacctggacgccctggatcccgaacaa
ctgcgtgcggcgaccgcaccgcgtggccccgtggcgatcatcgccggtgccggtaccggt
aagacccgcaccatcacccaccgcatcgcccacctggtcgccggtggtttcgtcaatccc
gatcacgtcctggcggtcactttcaccacccgggcagccgcggaactgagggagcggctg
accatgatgggtgtcgccagggtgcaggccaagaccttccacgccgccgcgcgaggccag
ctgcgctacttctggccccggttcgtcggcgacaccccgtggcagttgctggactcgaag
ttccctttcgtcgcccgtgcctgccgcgccaacggagtggcgacggacaagacgaccctg
tccgatctgctcggggagatcgagtgggcgaagtcctctctcatcgccccggaggactac
ccggcgcacatcggtccggaccgcagagactgcccggtggctccggagcagttcgtccgc
atcttcgagggctacgagaactcgaaggtgaccggcgagggtgtgtacctcgacttcgac
gatctgctgcagtcgatggccggtgccatcgaggctgatccgggtgtcgccgacgagttc
cggtcgcgctaccgcaccttcgtcgtcgacgagtaccaggacgtcaccccgctgcagcag
cgactgctggacgcctggctcggcgaccgtgacgacctcaccgtcgtcggcgacgcgaat
cagacgatctactccttcaacggtgcgaccccggagcatctgctccggttctcgtcgcgc
tacccggaggccaccacggtccgactgttccgtgactaccggtcgactccccaggtcgtg
gacctggcgaacaaggtcatcggccgggcgaccggacgtgccgccggcacccgtctggag
ctggagggccagcgtgcccccggcccggcaccggagttcaccgagtactccgacgaggcc
gcggaggccacgggtgtcgccgagcggatctccgccctgatcgcctcgggcgtctccccg
tcggagatcgcggtactctaccggatcaacgcccagtctgcggcgctcgaatacgcactg
gacgccgccggtatcagttaccaggtcaagggcggggaggggttcttccagcgcccggag
atccggcagggcgtcaacgcgctgaccgatgcggcccggagactgtcgcgccgtgatccc
ggagcagaggatcagccccgccccacaccggaacagctggtcaaccaggtccgggccgcc
ctggttccggtgggactgaccccgaccgagccgaccggtgcccaggaccgggcccgctgg
cagtccctcggcgcactggtggacctggcggaggagctctccaccgccaccccgggcctg
gacatgtcgaatctgctgggcatcctgcgcgagcgcgcccagtcgaagaatccgccgaaa
gtcgagggcgtgaccctggcgagcattcacgcggccaagggcctggagtgggacgccgtc
ttcctcatcggcctggtcgacggcaccgtgccgatccggcatgccctgaaggggacccac
tccgaggacgcgatcgaagaggaacgtcgactgctctacgtcggtgtcacccgtgcccgc
gaggtgctggaactgtcctgggcacaggcccgtcagcccggcggcaaggcgtcgcggcgt
cggacgcggttcctcgacgggctggtgccctgggagaaggcggacgccgcgtccggcacc
ggcaagacctcggtcaagggcgcgccgaagaacgcctgcgcggtgtgcggtgcccggctg
accacccccgagcagcggatcctcggccggtgcgacgcccatgccgaggacggtgaccag
gtgctcgtcaccgagttgcggtcctggcggaccacgctggcgaaggagcgggacgtgccg
gcctatgtggtgatgagtgatgcgacgttgaaggcggtggcgttgaaggcgccgacctcg
gcacgcgatctgctgaaggtgccggggatcggcccggcgaaggtcgagcagttcggcgag
gacatcctcggcatcgtgacgaactacagctga
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