Corynebacterium variabile: CVAR_2290
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Entry
CVAR_2290 CDS
T01594
Symbol
groEL1
Name
(GenBank) molecular chaperone
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cva
Corynebacterium variabile
Pathway
cva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVAR_2290 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cva03019
]
CVAR_2290 (groEL1)
03110 Chaperones and folding catalysts [BR:
cva03110
]
CVAR_2290 (groEL1)
03029 Mitochondrial biogenesis [BR:
cva03029
]
CVAR_2290 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cva04147
]
CVAR_2290 (groEL1)
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CVAR_2290 (groEL1)
Messenger RNA biogenesis [BR:
cva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CVAR_2290 (groEL1)
Chaperones and folding catalysts [BR:
cva03110
]
Heat shock proteins
HSP60 / Chaperonin
CVAR_2290 (groEL1)
Mitochondrial biogenesis [BR:
cva03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CVAR_2290 (groEL1)
Exosome [BR:
cva04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CVAR_2290 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
CVAR_2290 (groEL1)
Exosomal proteins of breast cancer cells
CVAR_2290 (groEL1)
Exosomal proteins of colorectal cancer cells
CVAR_2290 (groEL1)
Exosomal proteins of bladder cancer cells
CVAR_2290 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEK37637
UniProt:
G0HGN0
LinkDB
All DBs
Position
complement(2595286..2596902)
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AA seq
538 aa
AA seq
DB search
MSKLIAFDQEAREGLQRGVDTLADSVRVTLGPKGRNVVLDKAFGGPTVTNDGVTIARDID
LEDPFENLGAQLVKSVAIKTNDIAGDGTTTATLLAQALINEGMRIVAAGANPLELNRGID
AAAEKALASLRERAQPVADSSAIANVATVSSRDAEIGAKVSEAMDKVGKDGVLTVEESQS
ISDELVVTEGVSFDKGYLSPYFATEEETGHAVLENALVLLVREKISSLPDFLPVLEQVAK
SGKELFIVAEDVEGEPLQMLVVNSIRKSIKVVAVKAPYFGDRRKAFMDDLAVVTGGSVVD
KEIGGNLSEVKIEDLGTARRITVTKDETVIVDGAGTAADLEARRTQIRSEIEKTDSTWDR
EKLEERLAKLSGGVAVIRAGGATETEVNERKLRIEDAINAARAAAQEGVIAGGGSVLVQI
AAELDEFAASFEGDQAVGVKALARALRRPAFWIADNAGLDGAVVVSKIAERANGEGFNAA
TGEYGNLLEQGIIDPVKVTHSAVVNATSVARMVLTTETAVVDKPAVAGPAAAGHGHHH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctcatcgcatttgaccaggaggcccgtgaaggcctccagcgcggtgtcgac
acgttggcggactccgtgcgcgtcaccctcggccccaagggccggaacgtcgtgctcgac
aaggccttcggtggcccgaccgtcaccaacgacggcgtcaccatcgcccgcgacatcgat
ctcgaggaccccttcgagaacctcggtgcccagctggtgaagtcggtcgccatcaagacc
aacgacatcgccggtgacggcaccaccaccgccaccctgctggcacaggccctcatcaac
gagggcatgcggatcgtcgccgccggcgccaacccgctggagctcaaccgtggcatcgac
gccgccgccgagaaggccctggcgtccctgcgcgagcgcgcccagccggtcgccgacagc
tccgcgatcgccaacgtcgccaccgtctcctcccgtgacgccgagatcggcgccaaggtc
tccgaggccatggacaaggtcggcaaggacggcgtcctcaccgtcgaagagtcgcagtcc
atctccgacgaactcgtcgtcaccgagggtgtctccttcgacaagggctacctgtccccc
tacttcgccaccgaagaggagaccggccacgccgtccttgagaacgccctggtgctcctt
gtccgcgagaagatcagctccctgcccgacttcctgcccgtcctggagcaggtcgccaag
tccggcaaggaactgttcatcgtcgccgaggacgtcgagggtgagccgctgcagatgctc
gtcgtgaactccatccgtaagtccatcaaggtcgtcgccgtgaaggcgccgtacttcggt
gaccgacggaaggccttcatggacgacctcgccgtcgtcaccggcggttccgtcgtggac
aaggagatcggcggcaacctttccgaggtgaagatcgaggatctcggcaccgcccgccgg
atcacggtcaccaaggacgagacggtcatcgtcgacggtgcgggtaccgccgcggacctc
gaggcccgccgtacccagatccgttccgagatcgagaagaccgattccacctgggaccgg
gagaagctcgaggagcgactggccaagctgtccggaggtgtcgccgtcatccgtgccggt
ggcgccaccgagaccgaggtcaacgagcgcaagctgcgcatcgaggacgccatcaacgcc
gcccgtgccgccgcccaggaaggtgtgatcgccggtggcggttccgtcctggtgcagatc
gccgcggagctcgacgagttcgccgcgtccttcgagggtgatcaggccgtcggtgtgaag
gccctggcccgcgcactgcgccgtcccgccttctggatcgccgacaacgccggtctcgac
ggcgccgtggtggtctccaagatcgccgagcgcgccaacggtgagggcttcaacgccgcc
accggcgagtacggcaacctgctcgagcagggcatcatcgacccggtgaaggtcacccac
tcggcggtcgtcaacgcgacctccgtggcgcggatggtcctgaccaccgagaccgccgtc
gtggacaagcccgctgtggctggccccgccgcggccggccacggtcaccaccactag
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