Corynebacterium variabile: CVAR_2327
Help
Entry
CVAR_2327 CDS
T01594
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cva
Corynebacterium variabile
Pathway
cva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CVAR_2327 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cva03021
]
CVAR_2327 (rpoA)
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_2327 (rpoA)
Enzymes [BR:
cva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CVAR_2327 (rpoA)
Transcription machinery [BR:
cva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CVAR_2327 (rpoA)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CVAR_2327 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEK37672
UniProt:
G0HGR5
LinkDB
All DBs
Position
complement(2633538..2634551)
Genome browser
AA seq
337 aa
AA seq
DB search
MLISQRPQLTEEYISPARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTIPGVKEDVSDIILNIKALVISSDSDEPVTMYIRKEGLGEVTGADVVVPAGVEVHN
PDLHIATLNEQGKLDIELVVERGRGYVPAAATTGEIGRIPVDQIYSPVLKVSYKVEATRV
EQRTDFDKLVLDVETKNSITARDAIASAGGTLVELFGLARELNTEAEGIEIGPSPQETEH
IAAYSLPIEDLDFSVRSYNCLKREDIHTVGELAARTESDLLDIRNFGQKSINEVKVKLAE
LGLGLKDAPEGFDINSIEGYDAETGEFLDTEGEDIAE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcccagcgcccccaactgaccgaggagtacatcagcccggcccggtcgcgg
ttcgtcatcgaaccgctcgagcccggcttcggctacaccctcggtaactccctgcgtcgt
accctgctgtcgtccatcccgggcgctgcggtgacctccatccggatcgagggtgtgctc
cacgagttcaccaccattccgggtgtcaaggaggatgtctccgacattatcctgaacatc
aaggccctggtcatttcctcggactctgatgagccggtcaccatgtacatccgtaaggaa
ggcctgggcgaggtcaccggcgcggacgtcgtcgtccccgccggcgtggaggtccacaac
ccggacctgcacatcgccacgctcaatgagcagggcaagctggacatcgagctcgtggtc
gagcgcggtcgcgggtacgtcccggccgccgccaccaccggagagatcggccgcatcccg
gtcgaccagatctactccccggtgctgaaggtcagctacaaggtcgaggcgacgcgtgtt
gaacagcgcaccgacttcgacaagctggtcctcgacgtggagaccaagaactccatcacc
gcccgcgacgccatcgcgtccgccggtggaaccctggtggagctcttcggcctggcccgc
gagctgaacaccgaggctgaaggtatcgagatcggcccgtccccgcaggagacggagcac
atcgcggcctacagcctgcccatcgaggatctcgacttctccgtccgctcctacaactgc
ctcaagcgtgaggacatccacacggtcggcgagctcgccgcccgtaccgagtccgatctg
ctggacatccggaacttcggtcagaagtccatcaacgaggtcaaggtcaagctcgctgag
ctgggcctgggcctcaaggatgcgccggagggcttcgacatcaacagcatcgaaggctac
gacgccgagaccggcgagttcctggacaccgagggcgaggacatcgccgaatag
DBGET
integrated database retrieval system
