Corynebacterium variabile: CVAR_3017
Help
Entry
CVAR_3017 CDS
T01594
Symbol
cca
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
cva
Corynebacterium variabile
Pathway
cva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVAR_3017 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cva03016
]
CVAR_3017 (cca)
Enzymes [BR:
cva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
CVAR_3017 (cca)
Transfer RNA biogenesis [BR:
cva03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
CVAR_3017 (cca)
Prokaryotic type
CVAR_3017 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
PRD1_P5_C
Motif
Other DBs
NCBI-ProteinID:
AEK38360
UniProt:
G0HI98
LinkDB
All DBs
Position
complement(3403115..3404743)
Genome browser
AA seq
542 aa
AA seq
DB search
MSAVHGGHAGEPGAPGTAGGPGCFDDASDSWLTSVVPATVKGGPGCTIVGMQRDAGTMLA
TAQDAVKVHDRTLTALAGAFATRGHSLFLVGGSVRDALLGRLSHDLDFTTDARPEVVTGI
LDEVASTVWDTGIAFGTVSGLIHGMTVEITTFRADQYDGSSRNPEVTYGTSLDEDLVRRD
FRGNAIALELSADGAHELRDPLNGLEDLVNGVLDTPAAPEQSFHDDPLRMLRACRFASQL
GFEVAPRVQDAMTRMAAEIDRITVERVAAELDKLMLGAEPWTGLDLMVATGIAAHVLPEL
PALQLTQDEHRQHKDVYAHSLQVLRNVTELEGRLAGDPEEAEDAEALDHRRLVLRWAALM
HDCGKPATRAFTESGAVTFHHHEVVGARMTRKRLKALKFPKKTTEEIGQLVFLHMRFHGY
GEGAWTDSAVRRYVTDAGDLLPQLQLIVRADCTTRNKRKAARLQRVCDDLDARIVELKEK
EDLAAVRPELDGNEIMEILGLAPGPEVGKAWAYLKELRLDRGPMEHDEAVAALKDWWKDQ
DL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagttcatggtggtcacgctggtgaaccgggcgcgccggggaccgccgggggt
ccgggatgcttcgacgacgcctctgactcatggttgaccagcgtagtgcctgcgactgtg
aaagggggacccggctgtaccattgtgggaatgcaacgagatgccggaaccatgctcgcg
accgcgcaggacgccgtgaaagtccacgacaggacactcaccgccctcgccggcgccttc
gccacccgtggacattccctgttcctcgtcggcggttccgtccgggacgccctcctcgga
cgcctctcccatgacctcgacttcaccaccgacgcacgtccggaggtggtgaccgggatc
ctcgacgaggtggcatccaccgtctgggacaccggcatcgccttcggcaccgtctccggt
ctcatccacgggatgaccgtggagatcaccaccttccgggctgaccagtacgacggttct
tcgcgtaatccggaggtcacctacggcacctcgctggacgaggacctggtgcgccgggac
ttccgcggcaacgccatcgccctggaactgtcggccgacggtgcgcacgagctgcgggac
ccgctgaacggtctcgaggacctggtcaacggtgtgctcgacacgccggccgcccccgag
cagtccttccacgacgacccgctgcgcatgctccgcgcctgccgtttcgcctcccagctc
ggcttcgaggtcgcaccccgggtgcaggacgcgatgacacggatggccgccgagatcgac
cggatcaccgttgagcgcgtcgccgccgaactcgacaagctcatgctcggtgctgagccg
tggaccggcctggacctcatggtcgccaccggtatcgccgcgcatgtcctgcccgagctg
ccggccctgcagctcacccaggacgagcaccggcagcacaaggacgtctacgcccactcc
ctgcaggtgctgcgcaatgtcacggagctggaggggcggctggccggtgatcccgaggag
gctgaggacgctgaggcgctggaccaccgacggctggtgctgcggtgggccgcgctcatg
cacgactgcggcaagcccgccacgcgtgccttcaccgagtccggtgcggtgaccttccac
caccacgaggtcgtcggtgcgcggatgacgcgcaagcggctcaaggcactgaagttcccg
aagaagaccaccgaggagatcggtcagctcgtcttcctccacatgcgcttccacggctac
ggcgagggcgcgtggaccgattcggcggtgcgccggtacgtcaccgacgccggagacctg
ctcccccagctccagctcatcgtccgggccgactgcaccacgcggaacaagcgcaaggcc
gcccggctgcagcgggtctgcgacgacctggacgcccggatcgtcgagctgaaggagaag
gaggacctcgcggcggtgcgtcctgaactggacggcaacgagatcatggagatcctcggc
ctcgcgccgggaccggaggtcggcaaggcctgggcgtacctcaaggaactgcggctggac
cgtgggccgatggaacacgacgaggccgtcgccgcgctcaaggactggtggaaggaccag
gacctctag
DBGET
integrated database retrieval system