Congregibacter variabilis: R0135_00100
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Entry
R0135_00100 CDS
T10777
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03030
DNA replication
cvb03430
Mismatch repair
cvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0135_00100 (dnaE)
03430 Mismatch repair
R0135_00100 (dnaE)
03440 Homologous recombination
R0135_00100 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvb03032
]
R0135_00100 (dnaE)
03400 DNA repair and recombination proteins [BR:
cvb03400
]
R0135_00100 (dnaE)
Enzymes [BR:
cvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0135_00100 (dnaE)
DNA replication proteins [BR:
cvb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R0135_00100 (dnaE)
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R0135_00100 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
CcmE
Motif
Other DBs
NCBI-ProteinID:
WOJ93585
UniProt:
A0ABZ0I4Z2
LinkDB
All DBs
Position
20199..23705
Genome browser
AA seq
1168 aa
AA seq
DB search
MSDFVHLRVHSEYSLKDGLVRIKSLAARVAELEMPAVAVTDVCNFYGLIKFHKAAVSAGV
KPIFGADVWVTDSLKSDEAHPLCLLVMNPTGYHNLTRLLSRAYREGQTLDGPRVLWEWLD
EAGEGLLALSCGAAGEVGQALVNEKLDLARQRIERCLGVFPGRFYLELHRTGRVGDEEHV
HAALELAAQYNCPVVATNDVRFIDASEFEAHEARVCIAESRVLDDPRRQRRYSQEQYLRS
SKEMLELFEDIPEALENTVAIARRCSMEMELGRVCLPEYPVPDGMTMDTFFRESAHRGLD
ERLLSLQIHNRENAQQLEKEYRDRLDFELDTIISMGFPGYFLIVMDFIRWAKERGIPVGP
GRGSGAGSLVAYSMSITDLDPMEYELLFERFLNPERVSMPDFDVDFCMERRDEVIDYVAE
RYGREAVSQIITFGTLAAKAVVRDVARVQGKSYGLGDRLSKMIPFEVGMTLQKAIEQEES
LQQFLRDDGEAQEIWDMAVQLEGITRNVGKHAGGVVIAPSELTDFSALYCDGEGAGLVTQ
FDKNDVEDAGLVKFDFLGLRTLTIIDWAQGMINEIRARRDEPPLDVNQIPLDDHASFELL
RSAETTAVFQLESRGMKELIARLRPDSFEDIIALVALYRPGPLQSGMVDNFIDRKHGREK
VSYPDADYQHELLKPVLEPTYGIILYQEQVMQIAQILAGYTLGGADLLRRAMGKKKPEEM
AKQRSVFAAGAADKGVDADLATKLFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKSHYPA
AFMAAVMSSELDNTDKIVVFIEECRRMGLSVRLPDVNEGRYMFTVSEAGEIVYGLGAIKG
LGEGPVSGLLESREEHGPFHDLFDFCARTDPRKLNRKALEALVRSGAFDSLGTDRWILLG
GIDDALRAAEQNAANRDAGMVDLFGETVQASREQGDPYAELRHIRPWTDRERLQGERDTL
GLYVTGHPIDSCEEEIRRFVPQRLADLRPDNRGNCRVAGLILSMRAMKSSRGSMAVFVLD
DRSARLEATAYSEVYQQYRELLVKDQIVIAEGRLSQDDRSGATVMRVSALHSLADERERL
ASGLTLHVDASEVNDRFREFLRELLSSAPGQCPVRLRYHQGRQSASLLLGQQWRVSPSEE
LLEELRRELGGDRVKLAFDQKHSVGELH
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgattttgttcatctacgcgttcatagcgaatattcgctgaaggacggtctggtt
cgaataaagagtcttgcggcgcgcgtagcagagctcgaaatgcccgctgtagcggtcact
gatgtttgtaatttttacggtctgatcaagtttcacaaagcggcggtgagtgccggcgta
aagcccatcttcggtgctgacgtgtgggttaccgatagcttgaagagcgacgaggctcac
ccactgtgcttgctcgtgatgaatcctacgggttatcacaatcttacgcggctgctgtcg
cgggcttatcgtgaggggcaaacccttgatgggccgcgagtgctctgggagtggctcgac
gaggcgggagaggggcttttggcgctgtcctgtggtgcagctggggaggttggacaggcg
ctggttaacgaaaaactcgatcttgccaggcagcgtattgagcgctgcctgggggtattt
cccggacgcttctatctggagttacatcggacaggtcgtgtgggtgacgaggagcacgtg
catgccgctcttgagctggctgcacagtacaactgcccggtggtcgcaaccaacgacgtg
cggtttattgatgcgagtgagtttgaagcccatgaagcgcgggtgtgtatcgccgaaagc
cgcgtgctggatgatcctcgccgacagcgccgctacagtcaggagcaatacctgcgttcg
agcaaagagatgctcgagctgtttgaggacattccggaagccttggaaaacactgtggct
atcgcgcgccgctgttccatggagatggagctagggcgcgtatgcctgccggaatatccc
gttcctgacgggatgaccatggatacctttttcagggaaagtgcgcatcgaggtctggat
gagcgtttgttgtcactgcagattcacaatcgtgaaaatgcccagcagcttgaaaaggaa
tatcgagatcgcctggatttcgaactggacacgattatttccatggggtttccgggctac
ttcctgattgttatggattttatccgctgggctaaagagcgcggtattcccgtggggcct
ggacgcgggtccggtgccggctctcttgtggcttactcaatgtccatcaccgacctcgac
cctatggaatacgagttgctgttcgagcgattcctgaaccctgagcgggtctccatgccg
gactttgacgtcgatttttgtatggaacgccgggacgaggtgattgattacgttgctgag
cgttacgggcgcgaagcggtatcccagatcatcacctttggcaccttggccgccaaggcg
gtggtccgtgatgttgctcgggtgcagggtaagtcctacggcctgggcgacaggttgtcc
aaaatgattccctttgaagtggggatgacgctacaaaaggcgattgaacaggaggagagt
cttcagcagtttcttcgggatgatggagaggcccaggaaatctgggatatggctgttcag
ctcgagggcataacccgaaacgtcggcaagcatgccggtggtgtggttattgcgccctcg
gagcttacggacttttcggcgctgtactgtgacggtgagggcgccggactggtcacccag
ttcgacaagaatgatgtagaagatgcagggcttgtaaagtttgacttcctgggtctgcgc
acgctcacgatcatcgactgggcgcagggaatgatcaacgagattcgggcacggcgggat
gagccgcctctggatgtcaatcagattcctctggatgatcacgcgtcctttgagttgctc
cgttcggcggagaccaccgcggttttccagctcgaatctcggggcatgaaagagctaatc
gcgcgcctgagacccgacagctttgaggacattattgcgctcgttgcgctgtatcgaccg
ggccccttgcaatcggggatggttgacaacttcattgaccgcaagcacggtcgggagaag
gtgtcctatccggatgcggattatcagcatgaacttctgaaaccggttctggagcccacc
tacggcattattctgtatcaggaacaggtaatgcagattgcgcagattctcgccggctac
accctgggcggcgcggacttgcttcgccgggccatgggcaagaaaaagcccgaagagatg
gccaagcagcgctctgtatttgctgctggtgcggccgacaaaggcgtggatgctgatttg
gcaaccaagctgtttgatctggtagaaaagtttgccggctatggttttaacaagtcgcac
tcggccgcctatgcgctggtgtcatatcagactgcatggctgaagagtcattaccccgct
gcgtttatggcggcggtgatgagttctgaactcgataacaccgataagattgtggtcttc
attgaagagtgtcggcgcatgggacttagcgtgcgcctcccggacgtgaatgagggccga
tatatgttcaccgttagcgaggcgggcgaaattgtctatggtctgggtgccatcaagggc
ttgggcgaagggccggtctcggggcttcttgagagtcgtgaggagcacggtccttttcat
gatctgttcgatttttgtgccaggacagatccgagaaaacttaatcgcaaagccctggag
gcgttggtacgtagcggggcctttgactcgctgggcacagatcgctggatattgcttggt
ggtattgacgacgcgctacgcgcagccgagcaaaatgccgctaaccgcgatgccggcatg
gtcgacctgtttggcgagacagtacaggcgagccgagagcagggtgatccctatgcggag
ctgcggcacatccggccctggactgatcgagagagactgcagggcgagcgcgatacgctc
ggcttgtatgtaacagggcatcctatagacagctgcgaagaggagatacgtcgctttgtg
ccccagcgactggctgacctgcgccccgataaccgcggtaattgtcgtgtagccggactt
atcttaagtatgcgcgccatgaagagctcccggggatccatggcggtgtttgtgttggat
gaccgcagtgcacgactggaagctacggcttattcggaggtttatcagcaataccgcgag
ttgcttgtcaaagatcagattgttattgctgaaggacgcctttctcaggatgatcgcagc
ggtgctacggtaatgcgggtttcggctttgcacagccttgccgatgaacgcgagaggttg
gcatccggactgacgctgcatgtggacgcatctgaggtgaacgatcgttttcgggagttt
cttcgggagcttttatccagtgcgcccggccagtgccccgtgcgcctgcgttatcaccag
ggccggcagagcgcatccctgctgctgggccagcaatggcgtgtctcacccagcgaagag
ttactggaggaattgcgccgggagttggggggcgatagggtaaagcttgcttttgatcaa
aaacacagcgtaggagaattacattga
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