Congregibacter variabilis: R0135_00150
Help
Entry
R0135_00150 CDS
T10777
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cvb Congregibacter variabilis
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvb03000
]
R0135_00150
Transcription factors [BR:
cvb03000
]
Prokaryotic type
Helix-turn-helix
Other families
R0135_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_3
HTH_Tnp_ISL3
AAA
HTH_24
MCM
AAA_7
IstB_IS21
AAA_2
HTH_AsnC-type
TsaE
Motif
Other DBs
NCBI-ProteinID:
WOJ93595
LinkDB
All DBs
Position
37094..38698
Genome browser
AA seq
534 aa
AA seq
DB search
MSNRARILLIGYRKFSELINSVIAEYKDEAEIIMVESVASGSVDYQALVKEHQPDVVASA
GSNAAFLKNSLKIPVLSQPVTDTDIIDAVARARRIGARVHVFTYAPKPEPESRLFTALPS
LIGDGLKHETYTTTDEAAERLLAMAAADSADVVVGPSYICELASRRGLPAVLLYSRESAR
QMLDEALRQARVRSAERREAQQPGRFVIDSPQMSRVAELARTYARGNAAVLLQGESGTGK
EHIARELHQASDYRDGALVAINCGSIPNELFESELFGYVDGAFTSSRRGGRVGLVEQANG
GVLYLDEIGEMPLSQQVKLLRVLQERSVRPVGSTRELTLDFKVIAATNSNLQAAVDAGTF
RDDLYYRLNVFTLRLPPLRERPEDVAAIAQYYLREYAQQYEAELDVAALMQKLTGPFMKY
RWPGNVRELQNFAERLAVNAAHGVAIEELSLEELLPELLAPQQGEEIPPGLLKEQEARAI
ADAMHRFAGDKTAVSRELGISPTTLWRRLKEMDWNEGFGTGRAGDKKSKQYSRG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaatcgtgcccgcatattgttgattggctatcgcaagttcagtgagctcatcaat
tcggtcattgccgaatataaagatgaagccgagatcatcatggtggagtccgttgcttct
ggcagtgtggactatcaagctctggtaaaagaacatcaacctgatgtcgttgccagcgcc
ggttcaaacgccgcatttttaaagaactccctcaaaattcccgtgttgtctcagcctgtg
actgacaccgacattattgatgcagtagctcgtgcccggcgtattggggcacgtgtgcat
gtgttcacctatgcgccaaaacccgaacccgaaagtcgtcttttcactgctttgccgtct
ttgattggcgatggcctaaaacacgaaacttacacgaccactgacgaggcggcagagcgt
ttgttagcgatggcagcggcggacagtgccgacgtcgttgtgggacccagctacatttgt
gagctggccagccggcggggattgccggctgtgctgctttacagcagagagtcagctcga
cagatgctggatgaagccctgcggcaggcgcgagtgcgttccgcagagcggcgtgaagcg
cagcagccaggacgttttgtcattgactccccacaaatgtctcgtgtggcggagttggcg
cgaacctacgcccggggcaatgccgctgtgcttctgcagggagagagtggcaccggcaaa
gagcatatcgccagagagctgcatcaggcttcggattatcgtgacggcgctctggttgcc
attaactgtggaagcattcccaatgaactctttgagagtgagctttttgggtacgttgat
ggcgcgtttaccagctcccggcgaggcgggcgggtcggtctcgttgagcaggccaatggg
ggtgttctgtatctcgatgaaatcggtgagatgccgctatcacagcaggtcaagctgttg
cgggtgcttcaggagcgcagcgtgcggccggtgggaagcactcgagaactgaccttggac
ttcaaggtgatcgcggccaccaattcgaaccttcaggcggccgtagatgccggcactttt
cgtgatgatctttattaccgcctcaacgtatttactttacggcttccacctctgcgagag
cgtccggaggacgtggcagctattgcacagtactacttgcgtgaatatgcgcagcagtac
gaagcagagctggatgtggcggcacttatgcaaaagcttactgggccgttcatgaagtat
cgatggcccgggaatgtgcgggagctacagaattttgccgaacgtttggccgtaaatgcg
gcccatggcgttgctatcgaagagctaagtttagaggagctacttccagagttacttgcc
ccacagcagggagaggagatacctccgggtttacttaaggagcaggaagctcgcgcgatt
gcggatgctatgcatcgcttcgccggtgataaaactgcagtgagcagggagttaggtatc
agtccgaccactttgtggcgacgcctcaaagaaatggactggaacgagggatttggcaca
gggcgtgccggcgataaaaaaagtaaacaatactcacgagggtag
DBGET
integrated database retrieval system
