Congregibacter variabilis: R0135_01585
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Entry
R0135_01585 CDS
T10777
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cvb Congregibacter variabilis
Brite
Transcription machinery [BR:
cvb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
R0135_01585 (rapA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOJ93875
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Position
complement(358867..361608)
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AA seq
913 aa
AA seq
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MSYAIGQRWLSHADSELGLGIIVELDGRRVSVHFPAVEEERTYATENAPLTRVKLREGDS
LHTRDGRKLQVLAVHEEQELLIYEVASDGQRELVAELDLDDHIDLATPRQRLLASQIDSH
SAFALRMQTCTHIHELQQSGLRGLLGTRTALLPHQLFVANEVGKRHAPRVLLADEVGLGK
TIEAGMILHRQLLSGDSRRVLIMVPESLQFQWLVEMRRRFNLQFALFDESRLAEGDEGLN
PFEEEQLVLCASTLFLDPNARALALDADWDMLIVDEVHRLAWSADAPSEEFLFLETMAAQ
VPGLLLLTATPEQVGQEAHFARLSLLDPERFHDFPAFVEEESQYKRWSTLIDALDKGEPA
QGLPADIDPNASAESQIAALLDRYGTGRVLFRNARASVGGFPAREMHPHPLPAVDNPIYQ
DLYPDLHIDTEQWLQEDPRVAWLVGQLKSLRPEKVLVICAKAETALALESYLQLRAGIRS
AAFHEQLSLIERDRAAAYFAEQEQGAQALICSEIGGEGRNFQFAQHLILFDLPEHPDQLE
QRIGRLDRIGQRDRIFIHVPYIQGSAQETLMRWYHEGIDLFRASCSAGDMILTKFKIELE
KQLRQRGPDFDQLLEQTATFTARTRKELSEGRDKLLERSSCNAEQGLALGKAISDIEDPV
SLGEYLETLCAVTGIEHEEHGEHSSILRRGEQELLEVFPEVPEDGCTVTVSRDLALQRED
WIFLGWEHPWMENAMTTVLGSSLGQASVGAMTLKGVPGGSRLYELLFTVSLSAPRALGLQ
RYLPLAPRRLLLDANGRDLSKLLSHERLNERVEKLPRGTVSKIVRQLREEIEARIDDAEK
SFASELEARQAEAAAQYGKKLDEEIARLSSLREVNPAIRREEIDDLRDRRAAGLAALGTA
RATLQGVRLVLSR
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgccattggacagcgctggctgagccacgcagacagtgaattaggcttgggc
attattgtggagctggatggacgcagggtcagcgtgcactttccggcggtagaagaagag
cgtacctacgctacagaaaacgccccgctcacccgagtaaaacttcgcgagggggattct
ttgcacacccgcgatggacgcaagcttcaagtgcttgcggtccacgaggagcaggagttg
ctaatttacgaggtagccagtgacggccagcgtgaactggtagccgagctggaccttgac
gatcacatagatctggcaaccccccggcagcgcctcttggccagccaaattgacagccat
tcagcctttgccctgcgtatgcagacctgcacacacatccacgaacttcagcaaagcgga
ctccgagggcttctgggcacgcgcaccgcgcttctcccacaccagctgttcgttgctaac
gaagtcggtaaacgtcatgcaccccgagttctcctcgctgacgaagttggtcttggaaaa
accatcgaagcagggatgattcttcatcgccagttactcagcggagacagtcgccgcgtc
ctcatcatggttcccgagtccctgcagtttcaatggttagtggagatgcgccgtcgcttc
aaccttcaatttgctttgtttgatgaatcacgtcttgcagagggcgacgaaggtcttaat
cctttcgaagaggagcagttggtgctttgcgcgagcacgctgtttctggaccccaatgca
cgggctctggcgctagacgctgattgggacatgctcatcgttgacgaagtgcaccgtctg
gcctggagcgcagatgcaccgagcgaggaattcctgttcttagaaactatggccgcacag
gtcccgggactattgctacttaccgctacgccggagcaagtgggacaggaggctcacttc
gcacgactctcgctgcttgatccggagcgattccatgactttccggcatttgttgaggaa
gagtctcaatataagcgctggagcactcttatcgatgcgcttgataaaggtgagccagca
caaggattgcctgcggacatcgatcccaatgcgtccgcagaaagccagattgccgccctc
ttggaccgttatggaaccggtcgggtattgtttcgcaacgcccgggcaagcgtcggcggc
tttccggcgcgagaaatgcaccctcacccgttgcccgcggtagacaatccaatctaccag
gatctctacccagacctacacattgacactgagcagtggctacaggaagacccacgtgtg
gcttggctcgtagggcagctcaagtcactacgtcccgaaaaggttctggtgatctgtgcc
aaagcagaaacggcactggcgctggagagttatctgcagcttcgcgcaggcattcgctca
gcagctttccacgagcagctaagtcttattgagcgtgaccgagccgcagcgtattttgct
gaacaggaacaaggggctcaggccctcatatgctcagagattggtggtgagggtcgaaat
tttcagttcgcgcagcacctgatattgtttgatcttcctgagcatccagatcaattagag
cagcgaatcggacgtttggatcgcatcggccagcgggatcgtattttcattcacgttccc
tacatacaaggcagcgctcaggaaacactcatgcgctggtatcacgaaggcatcgacttg
ttccgggccagctgctcagccggcgacatgatcctcacaaaattcaagattgagctggaa
aaacaacttcgccagcgcggcccggactttgatcaactcctggagcagactgccactttc
acggcgcgcacgagaaaagagttaagcgagggtcgcgataagcttttggagcgaagctct
tgcaatgctgagcaaggccttgccctgggcaaggccattagcgacatcgaagatccggta
agtttgggggaatacctcgagacgctttgtgccgtaaccggtatcgagcacgaagaacac
ggcgagcacagcagtatcttacgtcggggcgaacaggaattactcgaggttttcccggag
gtgcctgaggacggttgcacggtgacagtgtcccgggatctggcgcttcaacgggaagac
tggatattcctgggctgggagcatccctggatggagaatgccatgacaacagtgttgggc
agctcactggggcaggccagcgtcggtgcaatgaccctcaaaggcgttcccggaggatca
aggctgtacgagctgttgttcacggtatcgctaagcgcgccgcgagcactcggcttacaa
cgttacctccctttggcaccccggcgtctgctccttgatgccaacggccgtgacttaagc
aagctcttaagtcacgaacgcctgaacgagcgcgtcgaaaagcttccgcgaggaacggtg
agcaagattgttcgccagcttcgcgaggagatcgaagcccgaatcgatgacgccgagaag
agtttcgccagcgaactggaggcccgtcaagccgaagccgcagcacaatacggtaaaaag
ctggacgaagagattgcgcgattgagttccttaagagaggtcaacccagctatccgccgc
gaggagatcgacgacctgcgagatcgccgtgctgcgggactcgcggcgctcggcaccgca
cgagccacacttcagggcgtgcgactagtgctaagccgctga
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