Congregibacter variabilis: R0135_05395
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Entry
R0135_05395 CDS
T10777
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00541
Biosynthesis of various nucleotide sugars
cvb01100
Metabolic pathways
cvb01250
Biosynthesis of nucleotide sugars
Module
cvb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R0135_05395 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
R0135_05395 (kdsA)
Enzymes [BR:
cvb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
R0135_05395 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
Lipid A
R0135_05395 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WOJ94599
UniProt:
A0ABZ0I500
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All DBs
Position
complement(1218507..1219355)
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AA seq
282 aa
AA seq
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MTTTVELGDLRIANDAPFVLLGGVNVLESREFALEVAAEYVSVCADLGIPLVFKASYDKA
NRSSIHSFRGPGLAKGLEILADVKSRFNVPLITDVHAPDQAAPAAEVCDIIQLPAFLARQ
TDLVRAMAETGAAINIKKPQFLSPAQMGNVVEKFRECGNERLMICERGSNYGYDNLVVDM
LGFGVMRAATKGVPQIFDVTHALQCRDPMGAASGGRRSQVTELARAGMAVGLAGLFLESH
PNPDKALCDGPSALPLDKLRPFLEQVQAVDTLVKGLPKLNID
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccgtagagctgggtgatctgcgcatcgctaacgatgcgccctttgtgctt
ttgggcggtgtgaatgttctggagagccgggaattcgcattggaggtcgctgcagagtac
gtgagcgtgtgtgctgatctgggtattccactggtctttaaagcctcttacgataaggcg
aatcgctcttccatacactcttttcgcgggcctggcttggcaaaaggcctggaaattctg
gcggacgttaagtcgcgatttaacgtgcctttgatcactgatgtgcatgcgcctgatcaa
gcggcgccagcagcagaggtctgcgatattattcagttaccagcttttcttgccaggcag
accgatctggtgcgagccatggccgagaccggtgctgcaattaacatcaaaaagccgcag
tttctgtcgccagcgcagatgggcaatgtcgttgaaaagtttcgagagtgcggtaacgaa
cgactcatgatctgtgagcgcggtagtaactacggatacgataatcttgtggtcgatatg
ctcggttttggcgtgatgcgagctgctaccaagggtgtgccgcaaattttcgacgtgacc
cacgccctgcaatgccgggatcctatgggtgctgcttctggcggtcgtcgatctcaggtt
acggagttggcccgcgcgggtatggcagtgggcttggcaggactgtttctcgagtctcac
ccaaatccggataaggcgctctgtgatggtcccagcgctttacctctggataagttgcgt
ccgtttctcgagcaagttcaggcggtagatactcttgtgaaaggtttgcccaaactcaac
atagattga
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