Congregibacter variabilis: R0135_06905
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Entry
R0135_06905 CDS
T10777
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cvb Congregibacter variabilis
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvb03009
]
R0135_06905 (rimO)
Enzymes [BR:
cvb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R0135_06905 (rimO)
Ribosome biogenesis [BR:
cvb03009
]
Prokaryotic type
ribosomal protein modification factors
R0135_06905 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
HTH_TGH
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WOJ94891
UniProt:
A0ABZ0I9X1
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All DBs
Position
1574921..1576252
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AA seq
443 aa
AA seq
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MSSDSGNNSTVGFVSLGCPKALVDSERILSQLKLDGYDIVGSYADAELVVVNTCGFIDSA
KEESLQAIGEAISENGRVIVTGCMGKGADAERIRAEHPKVLSVTGPAAYEEVVAAVHEYV
PAPPPRDAFTDLIPTSSIRLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGDVMD
EAEALVRSGVRELLVISQDTSAYGVDLKYRTGFWQGRPLSTRMESLCAALGELGVWVRLH
YVYPYPHVDKVIPLMAEGKILPYLDIPFQHASHAVLKRMKRPAATEKVLNRIHNWRSQCP
DITLRSTFIVGFPGETDAEFEELLSFLDEAQLDRVGCFQYSPVTGAAANELADHVPDEVK
QERYERFMLRQQAISAQRLQARVGREIEVLIDTVDHEGAIGRSSADAPEIDGRVHIPTAT
DLTPGDWVRGTVSKADEYDLWID
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgattctggcaacaacagcaccgtaggttttgtaagcttgggctgcccaaaa
gccctggtagactccgagcgaatcctctcgcaactgaaactggacggctatgacattgtc
ggcagctatgccgacgccgaactggttgtagtcaacacctgcgggtttatcgacagcgcc
aaggaagaatcacttcaggccatcggcgaagccatctcagagaatggtcgcgtcatcgtc
accggctgcatgggcaagggagctgatgccgagcgtattcgtgcggagcacccaaaggta
ctctcggtaacagggccggcggcctacgaagaagtcgttgcagcggtacacgaatatgtt
cctgcaccacccccgcgagacgcattcaccgaccttatccccacatcgtcgatacgactc
actccgcggcactatgcctatctaaagatctccgaaggctgcaaccatcgatgcagcttt
tgcattatcccttccatgcgcggagaccttgttagtcgccccatcggtgatgtcatggac
gaggccgaggcgctggtgcgctcaggtgttcgggaactacttgtgatctctcaggacacc
agtgcttacggcgtggacctgaagtaccgcacgggattctggcagggccgtccgttgtcg
actcgcatggaaagcctgtgcgccgccttgggcgaactcggcgtatgggtccggctgcac
tatgtttacccctacccccatgtggacaaagtgatccccctgatggcggaaggaaaaatc
ctcccttatctggatattcctttccagcatgcgagccatgccgttctcaaacgtatgaag
cgaccagcggccacagaaaaagtgcttaaccgtattcataattggcgctctcagtgcccc
gatatcacactgcgaagcacttttattgtgggctttcccggcgagaccgatgctgagttc
gaagagctgttgagttttctcgacgaagcgcagctggatcgcgtgggctgcttccaatac
tccccggtcaccggcgcagcagcgaatgaactggcagaccacgttcctgatgaagttaag
caggagcgctacgaacgtttcatgctgcgccagcaggccattagtgcacaacgccttcaa
gcacgggtgggccgtgaaattgaggtgctgatagacaccgtggatcacgaaggcgccata
gggcgttccagtgccgatgctccagagatagacgggcgggtacatattcccacagccaca
gacttaacgccgggagactgggttcgtggcacggtatccaaagctgacgaatacgacctc
tggatcgactag
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