KEGG   Congregibacter variabilis: R0135_07035
Entry
R0135_07035       CDS       T10777                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
cvb  Congregibacter variabilis
Pathway
cvb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cvb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R0135_07035 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cvb02044]
    R0135_07035 (gspD)
Secretion system [BR:cvb02044]
 Type II secretion system
  General secretion pathway protein
   R0135_07035 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Tr-sialidase_C
Other DBs
NCBI-ProteinID: WOJ94916
UniProt: A0ABZ0I6N4
LinkDB
Position
complement(1599434..1601449)
AA seq 671 aa
MRSAFVLPLLLGLWGASAKAQDFTVNLKDTDIQELIKFVSEATDTTIVVDPSVKGKVKVV
SSRPVNASELYDLFLAILDVHGYTAVRSGAVVRVIQNKDARSAPVPVAGDAAPGLINDEY
ITQVLRLDNISAAKLIPVLRPLVPQQAHMAAYAPSNAIIISDSASNISRIRDIIERMDQS
AVQETDVIAMRYAVAEDVVRMLETLNATEAKNNGGEVDVLLVPDKRTNSLLVSGDELQRA
RIRKLVAYVDTPLEQTGNVKVIYLEYAQATAIAEVLTRVMQNISKLDTGDSKAARSSSNT
ATIEADEGTNSLIITADPDEMAAVESVITRLDIRRAQVLVEAIIVELEVTDGQDLGLQWL
FANDNGFYGSSINASDARARNIAGAILPSDGGSGSGSTTGDFDVGNLAAALAGSAGLSLG
WGVVGEDLSMTVILNALEEQSNANILSTPSLLTLDNEEAFITVGQQVPFITGSFTNTGGN
NGAQNPFQTIERENVGITLTVTPQVNEGDSVVLEIEQEVNSLTGATLVASASAADLITNE
RKIRTKVLAEDGRIVVLGGLIKDDVQSTEQRVPILGDIPFFGRLFRNDAVSVSKTNLMIF
IRPTIIRDDKALAGATALKYRHIRDQQRVQKEQGLMFFEDSEVPVLPDWERQILQLEKIR
DDIRAPDVESQ
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgcgttcagcattcgtgctcccactgctgctgggtctttggggggcttcggcaaaggca
caggacttcactgtaaatctgaaagatacagatattcaggaactgatcaaattcgtctca
gaagccactgatacaacgatcgttgttgatccgtcggtgaagggaaaggtcaaggtggtt
tcctcgcggccggtcaatgccagcgagctttacgacctgtttcttgcgattctggatgtg
cacggctacaccgcggtgcgctccggtgcggttgtgagagtgattcagaacaaggatgcg
cgatcggcgccggttcccgttgctggcgatgctgctccaggcctcataaatgatgagtac
attacccaggtgctccgcctggataatatctctgcggctaagctgattcccgtactgcgc
cccctggttccgcagcaggcgcatatggcggcttatgcacccagtaacgccattatcatt
tctgattccgcctccaatatcagccgcatccgcgacatcattgagcgtatggaccagtct
gcagtacaggagaccgacgtcattgccatgcgctatgcggtggcagaagacgtagtaaga
atgctcgagacactcaatgccaccgaggccaagaacaacggtggtgaggtagacgtgctc
ctcgtgccagacaagcgtactaacagtttactggtgtcgggcgacgaactgcagcgagcg
cgtattcgcaaactggtcgcttatgtggacacgccactggaacagacgggcaacgtcaag
gtcatttatctggagtacgcgcaggctacggcgatcgctgaggtccttacccgggtaatg
cagaacatcagcaagctcgacacgggagacagtaaggccgcccggtcatcaagtaataca
gccactatcgaagccgatgagggtaccaactcactgatcattacggccgatcccgatgaa
atggccgccgtagaatctgtgatcacccggctggatatccggcgcgcacaggttcttgtg
gaagccattatcgtggaacttgaagtcactgacggacaggatctgggtttgcagtggttg
tttgccaatgacaacggattttatggcagcagcattaatgcctcggacgcacgggctcgg
aatattgccggtgcgattcttccgtccgacggtggttcgggctctggttcgactaccggt
gacttcgatgtgggtaatctggcggcggctctcgctggatctgcaggtctttccctgggt
tggggtgtagtaggagaagacctgagtatgactgttatcctcaacgcgcttgaggagcaa
agcaacgcgaatatcctgtctacgccaagcctgcttactttggataatgaagaagcattc
atcaccgtggggcagcaggttccctttatcacagggtcctttacaaacaccggtggaaat
aatggcgctcagaatccctttcagaccattgagcgtgagaacgtgggtattacgcttaca
gtaacgccgcaggtgaacgagggcgactcggtagttcttgagatcgagcaggaagtgaac
tctcttaccggtgccacgctggtcgcatcggcatcggcggcggatctgataaccaatgag
cgaaagattcgtaccaaggtactcgcagaggacggtcggattgtcgtgctcggcggattg
ataaaagatgacgtgcagagtactgagcagcgcgttccgattctgggcgatatacctttc
tttggaaggctgtttcgcaatgatgccgtctccgtgagcaaaaccaaccttatgatattt
attcgcccgacgatcattcgcgacgataaggccctggccggagcaactgcgcttaagtat
cgacatattcgggatcaacagcgtgttcaaaaagaacagggattgatgttcttcgaagac
agcgaggtgccggtgctgcctgattgggagcgacagatcctgcagttggaaaaaattcga
gacgacatccgggctcctgatgtggagtcgcagtga

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