KEGG   Congregibacter variabilis: R0135_08665
Entry
R0135_08665       CDS       T10777                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cvb  Congregibacter variabilis
Pathway
cvb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R0135_08665 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvb03019]
    R0135_08665 (pnp)
   03016 Transfer RNA biogenesis [BR:cvb03016]
    R0135_08665 (pnp)
Enzymes [BR:cvb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     R0135_08665 (pnp)
Messenger RNA biogenesis [BR:cvb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     R0135_08665 (pnp)
Transfer RNA biogenesis [BR:cvb03016]
 Prokaryotic type
  tRNA degradation factors
   R0135_08665 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_RRP5 S1_2 KH_2 OB_RRP5_4th KH-I_KHDC4-BBP SPATA25 KH_KhpA-B
Other DBs
NCBI-ProteinID: WOJ91866
LinkDB
Position
complement(1977850..1979982)
AA seq 710 aa
MNPVTKTFQYGGQTVTLETGRIARQASGAVLVTVENTSVLVTVVAEKTAREGRDFFPLAV
HYIEKAYSVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPNGFMNEVQVICTVMSAD
KHIDPDIPAMIGTSAALAISGCPFNGPIGAARVGFNDAEGYILNPTYDQLPSSKLEMVVA
GTEDAVLMVESQADQLTEDQMLGAVLFAHQEMQVVIKAVQELVAEAGKPSWNWEAPAVDE
ALLSAVDDKVKDDLGEAYRITDKSERYARVGEIRESCVAQLAVEDGPSADLVKDYFKKVE
KSLVRKRIISGEPRIDGRDTRTVRQIACEVDVLAKAHGSALFTRGETQAIGAVTLGSTRD
SQIIDALEGERRDPFMLHYNFPPYSVGEAGRVGFTSRREIGHGRLARRGLAAVLPDLEEF
PYTIRVVSEITESNGSSSMASVCVGSLAMMTAGVPLKAPVAGIAMGLVKEGNQFAVLTDI
LGDEDHLGDMDFKVAGTANGVTALQMDIKIEGITEQIMEIALEQAMQARLHILGQMNAVL
AAPRTVTSENAPSMVTLKVDSDKIRDIIGKGGAMIRSITEHSGATVDIEDDGTVRVFGQD
QASRDKAVAMIEEITAEAEVGAIYTGKVERIVDFGAFVNILPGKDGLLHISQIANERVEN
VSDHLSEGQEVRVKVLDVDQRGRIKLSIKELLEDEASPAEAAPAEAASDD
NT seq 2133 nt   +upstreamnt  +downstreamnt
gtgaacccagttactaaaacctttcagtatggcggtcagaccgtcacgctggaaacaggc
cgcatcgcccgtcaggcgagtggcgccgtgcttgttactgtcgaaaacaccagtgttctg
gtgaccgttgtcgctgagaagacagctcgcgaaggacgcgacttcttcccgctggctgtg
cactacatcgagaaagcctattctgtgggcaagatccccggtggttttttcaagcgtgaa
gcacgccccagtgaaaaagagacactgacctcacgtctgatcgaccgtcctattcgtccg
ctgtttcctaatggcttcatgaatgaggtacaggtaatttgtaccgttatgtctgcggat
aagcatatcgatccagatatccctgcaatgattggtacttctgctgccctggcaatttct
ggttgcccctttaacgggcctatcggtgctgctcgagtgggcttcaacgatgccgagggt
tacattcttaaccccacgtatgaccagctccctagcagcaagcttgagatggttgttgct
ggtactgaagatgcggtactcatggttgagtcgcaggctgaccagttgactgaagatcag
atgctgggcgcggttttgttcgcccatcaggaaatgcaggtcgttatcaaagcggtgcag
gaacttgttgcagaagctggcaagccaagctggaattgggaagcacctgccgttgacgaa
gcgctgcttagcgctgttgatgacaaagtgaaggacgatcttggcgaagcctaccgaatt
actgacaagtctgaacgttacgcccgagtcggtgagattcgtgaatcttgtgttgcacag
ctggcggtagaggacggccccagtgccgacctggtcaaggactacttcaagaaagttgaa
aagtccctggttcgcaagcgcatcatttccggtgagccgcgtattgatggtcgtgataca
cgcactgtgcgtcaaattgcctgcgaagttgatgttctggcaaaagctcacggttccgcc
ctgtttacccgtggcgaaactcaggctatcggtgctgtgactctgggttctacccgtgat
tcacaaatcattgatgcgctggaaggcgaacgtcgcgatccgttcatgctgcactataac
ttccctccttattcagtaggcgaagcagggcgtgttggcttcaccagtcgccgagagatc
ggtcatggtcgtttggctcgtcgtggccttgctgcggtactgccggatctggaagagttt
ccatacactattcgcgttgtctcagagatcaccgagtcaaacggttcaagctcgatggca
tcggtgtgtgtaggttctctggcgatgatgactgcaggtgtacctctaaaggcaccggtt
gctggtattgccatgggtcttgtgaaagaaggcaatcagtttgctgttctcacagacatt
ctgggtgacgaagatcacctcggcgacatggactttaaagtcgctggtacggctaacggc
gtaactgccctgcagatggatatcaagatcgaaggcatcactgagcagatcatggagatt
gcgctcgagcaggctatgcaggctcgtctgcacatcctcggtcagatgaacgctgtgctg
gctgcaccgcgtacggtaacctccgagaatgcgccaagcatggtgaccttgaaggttgat
tccgacaagattcgcgacatcattggtaagggtggtgcgatgattcgctccatcactgag
cactccggagctacagtagatatcgaagacgatggcactgtccgtgtattcggtcaggac
caagcgtcacgtgacaaagctgtcgcgatgatcgaagagatcactgccgaggcagaagtc
ggtgctatctataccggtaaggttgagcggatcgtcgactttggcgctttcgttaacatc
ctccccggcaaagatggactgctgcatatctcgcagatcgccaatgagcgcgtagagaat
gtttctgaccacttaagtgaaggtcaggaagtgcgcgttaaggttctggatgtagatcag
cgcggtcgtatcaagctgtctatcaaggaactgcttgaagatgaagcttcgcctgcagaa
gctgcccctgcagaagcagcgagcgacgactga

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