Congregibacter variabilis: R0135_08675
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Entry
R0135_08675 CDS
T10777
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cvb Congregibacter variabilis
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvb03016
]
R0135_08675 (truB)
Enzymes [BR:
cvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R0135_08675 (truB)
Transfer RNA biogenesis [BR:
cvb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R0135_08675 (truB)
Prokaryotic type
R0135_08675 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WOJ91868
LinkDB
All DBs
Position
complement(1980508..1981437)
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AA seq
309 aa
AA seq
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MARRRRGRALSGILLLDKPLGMSSNQALQRCKWLYSAAKAGHTGSLDPLATGVLPLCFGE
ATKFSQYLLDADKGYDSTFCLGRSTQTGDSEGETVSEADASDLDLSQIEQALEALRGPIA
QLPPMYSAIKRDGQPLYKLARAGIEVERQPRPVTIMSLEVLAFRPGVRAEVDVRILCSKG
TYVRSLAMDLGEALGVGGHVTALRRTKAGPFELAECVTMPALEALHGSQNLVAMDAFLKP
TDTAVAHMPLLTLPESSGFYLRQGQPVLVPNAPRDGMVRVALETGEFLGLGEILDDGRVA
PRRLVVSGG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgacggcgccgtggtcgagcactatccggcattcttcttttagataaacctctg
gggatgagctccaatcaggctttgcagcgctgcaagtggttgtacagcgcggctaaggcc
ggacacacgggtagcctggaccctttggcgactggcgtattgcccctgtgttttggtgag
gccacgaagttttcgcagtatcttctggatgcagataaaggctatgacagcactttttgt
ctgggccgaagcacacagaccggcgattctgaaggtgaaacagtcagcgaagccgatgct
tcagatttagatttgtcgcagattgagcaggctttggaggcgcttcgcgggcctattgcg
cagctgcctcccatgtactcggcgattaaacgcgatggtcagccgctgtataaattagcg
cgagctgggatagaggttgagagacagcctcgcccggtgaccatcatgtccctggaggtg
ttggcgtttcggcccggtgtgcgcgctgaagtggatgttcgcatcctttgcagcaaaggc
acctacgtgcggtctctggcaatggaccttggcgaggcactgggcgtcggagggcatgtc
accgctttgcgacgaacaaaagcgggcccgttcgaactggcagagtgtgtcacgatgccg
gccctggaagcccttcacggtagccagaatttggtggctatggatgcttttcttaagccc
acggacaccgcggtggcgcatatgccgttgcttacgctgcccgaatccagtgggttttac
ctccgtcaggggcagccggtgctagtgccaaatgcgccccgtgatggtatggtgcgcgtc
gctttagagaccggtgagtttctggggcttggtgaaattctggacgacgggcgtgttgcg
ccccgtcgcctggttgtcagcggtggataa
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