Congregibacter variabilis: R0135_09320
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Entry
R0135_09320 CDS
T10777
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00550
Peptidoglycan biosynthesis
cvb01100
Metabolic pathways
cvb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R0135_09320 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R0135_09320 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cvb01011
]
R0135_09320 (mrdA)
Enzymes [BR:
cvb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R0135_09320 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cvb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R0135_09320 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WOJ91986
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Position
complement(2126417..2128258)
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AA seq
613 aa
AA seq
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MATRVVLKDTQREQRIFGARSLVALGFVTLLLGVLLARYYGLQINDYEAYSTASERNRVQ
LQPLPPKRGLIYDRNGVLLADNRPSYTLSLIIERVDDLDATLASLAELVEIEESDLDKFR
TRVRQRRPYDPVPLRFRLDDVEQARIAVNRHRLPGVTVEAQLQRYYPHGELFAHALGYVG
RINVEEMTQIDQADYRGTFHIGKIGIERRYEDELHGTVGYQTVETNAHGRVLRVLERFDP
SPGEDLILHLDYELQRVAHEKLAGRRGAVVAIDPLTGGVLALVSTPSFDSNLFVNGISSR
NYNALRDSPDVPLFNRTVQGQYPPGSTVKPMIAMAGLEAGLIDPLYTVPDPGWYRLPGDR
RRYRDWILRIRGTGHAPEVDLKMALAESCDVYFYDLARRLTVDGIHDYLDHYGLGRRTGI
DTTAERRGVLPSTAWKRAALGQTWYPGETLSVGIGQGYMLATPLQLAVATSVLATQGEHR
EPRLVQWLGNEALEAPMLEPLMADGANWDAVVEGMREVVHGRRGTAKAIAKGMNYEMAGK
TGTAQVIGIAQDAVYNEDEIDARHRNHGLFIAFAPLDAPTIAVAVIVENGGGSSAAYPIA
RAVVDAWLEREAS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgcgtagttctcaaagatactcaacgcgaacagcgtatttttggcgcccgc
agtcttgtggcgctgggctttgtcacgttgctccttggtgtgttgttggcccggtattac
ggcctgcagatcaacgattatgaagcctatagcacggcctctgaacgcaatcgcgtgcag
ctccagcctttgccgcccaagcgaggcctgatttacgatcgcaacggcgtgctgctggct
gacaaccgtcccagctacacactgtcgctcatcattgagcgggtcgacgacctcgatgcc
accttggccagtctggctgagcttgtggaaattgaagagagcgaccttgacaagtttcgc
actcgggtccgtcagcgccggccctatgaccctgtacctctgcgctttcgtcttgatgac
gtggagcaggctcgcattgcggtgaaccggcatcgcctcccgggcgtgacggtagaggcc
cagttgcagcgctactatccccacggcgagctgtttgcgcatgctttgggctatgtggga
cgtatcaacgttgaagaaatgacccagattgaccaggcggattatcgcggcacatttcat
atcggcaaaatcggtattgagcggcgctacgaagatgaactgcacggtaccgtgggttac
caaaccgtagagacgaatgcccacgggcgggtgctgcgggtgctggagcgttttgacccc
agtcccggtgaagacctcattctgcatcttgattacgagctgcaacgtgtcgcgcacgag
aaactggcgggacgccgcggcgccgtggtggccatcgatccactcaccggcggcgtgctg
gcactggtgagcaccccttcctttgacagcaaccttttcgtcaacggtatcagtagccgc
aactacaacgcgctgagggactctccagacgtgcctttgttcaatcgcacggttcagggg
cagtatcccccgggatcaacggtcaagccgatgatcgccatggccggcctcgaggctggt
ttgatcgacccactgtatacggtcccggaccccggttggtatcgccttccgggtgaccgg
cggcgttatcgagactggattttgcgcattcgtggtaccggtcatgctccggaagtggac
ctgaaaatggccctggccgaatcctgcgacgtgtatttttatgatcttgcgcggcgtctc
actgtggatggtatccacgattatctcgaccactacggtctgggtcgtcgcacgggcatt
gataccacagcggagcgccgcggggttcttccgtctaccgcctggaagcgcgccgcactg
ggtcagacctggtatcccggagagacattgagcgtagggattggccagggatatatgttg
gcgacaccgctacagctagcggttgccacctcggtgctcgccacacagggtgagcatcgc
gagccacgattggtgcaatggttgggcaacgaggcactggaagctcctatgcttgagccg
ctcatggccgatggcgcgaattgggacgctgtcgttgagggtatgcgcgaagtggtgcac
ggtcggcgcggtacagccaaggctatcgccaaaggtatgaattacgaaatggccggtaaa
accggtacggcgcaggttatcggtattgctcaggatgcggtttataacgaagacgaaatc
gacgccagacatcgtaatcacggcctgtttattgcctttgctccattggacgcgccgacc
atcgcggtggcggtgatcgtcgaaaacggtggtggtagcagtgcggcttatcccattgcc
cgggcggtcgttgatgcctggctcgagcgggaagcgagctag
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