KEGG   Congregibacter variabilis: R0135_09320
Entry
R0135_09320       CDS       T10777                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
cvb  Congregibacter variabilis
Pathway
cvb00550  Peptidoglycan biosynthesis
cvb01100  Metabolic pathways
cvb01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:cvb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    R0135_09320 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    R0135_09320 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cvb01011]
    R0135_09320 (mrdA)
Enzymes [BR:cvb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     R0135_09320 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:cvb01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   R0135_09320 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: WOJ91986
LinkDB
Position
complement(2126417..2128258)
AA seq 613 aa
MATRVVLKDTQREQRIFGARSLVALGFVTLLLGVLLARYYGLQINDYEAYSTASERNRVQ
LQPLPPKRGLIYDRNGVLLADNRPSYTLSLIIERVDDLDATLASLAELVEIEESDLDKFR
TRVRQRRPYDPVPLRFRLDDVEQARIAVNRHRLPGVTVEAQLQRYYPHGELFAHALGYVG
RINVEEMTQIDQADYRGTFHIGKIGIERRYEDELHGTVGYQTVETNAHGRVLRVLERFDP
SPGEDLILHLDYELQRVAHEKLAGRRGAVVAIDPLTGGVLALVSTPSFDSNLFVNGISSR
NYNALRDSPDVPLFNRTVQGQYPPGSTVKPMIAMAGLEAGLIDPLYTVPDPGWYRLPGDR
RRYRDWILRIRGTGHAPEVDLKMALAESCDVYFYDLARRLTVDGIHDYLDHYGLGRRTGI
DTTAERRGVLPSTAWKRAALGQTWYPGETLSVGIGQGYMLATPLQLAVATSVLATQGEHR
EPRLVQWLGNEALEAPMLEPLMADGANWDAVVEGMREVVHGRRGTAKAIAKGMNYEMAGK
TGTAQVIGIAQDAVYNEDEIDARHRNHGLFIAFAPLDAPTIAVAVIVENGGGSSAAYPIA
RAVVDAWLEREAS
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggctacccgcgtagttctcaaagatactcaacgcgaacagcgtatttttggcgcccgc
agtcttgtggcgctgggctttgtcacgttgctccttggtgtgttgttggcccggtattac
ggcctgcagatcaacgattatgaagcctatagcacggcctctgaacgcaatcgcgtgcag
ctccagcctttgccgcccaagcgaggcctgatttacgatcgcaacggcgtgctgctggct
gacaaccgtcccagctacacactgtcgctcatcattgagcgggtcgacgacctcgatgcc
accttggccagtctggctgagcttgtggaaattgaagagagcgaccttgacaagtttcgc
actcgggtccgtcagcgccggccctatgaccctgtacctctgcgctttcgtcttgatgac
gtggagcaggctcgcattgcggtgaaccggcatcgcctcccgggcgtgacggtagaggcc
cagttgcagcgctactatccccacggcgagctgtttgcgcatgctttgggctatgtggga
cgtatcaacgttgaagaaatgacccagattgaccaggcggattatcgcggcacatttcat
atcggcaaaatcggtattgagcggcgctacgaagatgaactgcacggtaccgtgggttac
caaaccgtagagacgaatgcccacgggcgggtgctgcgggtgctggagcgttttgacccc
agtcccggtgaagacctcattctgcatcttgattacgagctgcaacgtgtcgcgcacgag
aaactggcgggacgccgcggcgccgtggtggccatcgatccactcaccggcggcgtgctg
gcactggtgagcaccccttcctttgacagcaaccttttcgtcaacggtatcagtagccgc
aactacaacgcgctgagggactctccagacgtgcctttgttcaatcgcacggttcagggg
cagtatcccccgggatcaacggtcaagccgatgatcgccatggccggcctcgaggctggt
ttgatcgacccactgtatacggtcccggaccccggttggtatcgccttccgggtgaccgg
cggcgttatcgagactggattttgcgcattcgtggtaccggtcatgctccggaagtggac
ctgaaaatggccctggccgaatcctgcgacgtgtatttttatgatcttgcgcggcgtctc
actgtggatggtatccacgattatctcgaccactacggtctgggtcgtcgcacgggcatt
gataccacagcggagcgccgcggggttcttccgtctaccgcctggaagcgcgccgcactg
ggtcagacctggtatcccggagagacattgagcgtagggattggccagggatatatgttg
gcgacaccgctacagctagcggttgccacctcggtgctcgccacacagggtgagcatcgc
gagccacgattggtgcaatggttgggcaacgaggcactggaagctcctatgcttgagccg
ctcatggccgatggcgcgaattgggacgctgtcgttgagggtatgcgcgaagtggtgcac
ggtcggcgcggtacagccaaggctatcgccaaaggtatgaattacgaaatggccggtaaa
accggtacggcgcaggttatcggtattgctcaggatgcggtttataacgaagacgaaatc
gacgccagacatcgtaatcacggcctgtttattgcctttgctccattggacgcgccgacc
atcgcggtggcggtgatcgtcgaaaacggtggtggtagcagtgcggcttatcccattgcc
cgggcggtcgttgatgcctggctcgagcgggaagcgagctag

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