Congregibacter variabilis: R0135_09675
Help
Entry
R0135_09675 CDS
T10777
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00300
Lysine biosynthesis
cvb00470
D-Amino acid metabolism
cvb01100
Metabolic pathways
cvb01110
Biosynthesis of secondary metabolites
cvb01120
Microbial metabolism in diverse environments
cvb01230
Biosynthesis of amino acids
Module
cvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R0135_09675 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R0135_09675 (lysA)
Enzymes [BR:
cvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
R0135_09675 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOJ92054
UniProt:
A0ABZ0HZR6
LinkDB
All DBs
Position
2210576..2211820
Genome browser
AA seq
414 aa
AA seq
DB search
MGFTYRNERLFAEELDCEAIAEEYGTPCYVYSRAAMEAALAQYHQALKGCEYLVCYAVKA
NSNIAVLDTLARCGAGFDIVSVGELERVLAAGGDPGKVVFSGVVKRPDEMRRALQVGIRC
FNVESAAELEVLQSVAAELNVRAPVSVRVNPDVDAGTHPYISTGLRENKFGVATDAAMAL
LRRATTMENIHITGLDCHIGSQLVDMSPLLDALQQLLLMVDALQAEGIHIRHLDLGGGIG
VRYRDEEPPAVADYIAAVREALGDRDLGLVFEPGRSIVANAGVLLTRVHYLKETDAHSFA
LVDAAMNDFIRPALYQAWVDIQATSPNDAEPRLWNIVGPVCETGDFLGKDRELALASGTL
LAIHGAGAYGFVMSSNYNTRPRAAEVMIDGNKPYLIRERETIGDLLRGEHRLPQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggattcacttaccgtaacgaacgtttgtttgctgaagaactggattgcgaagccatc
gctgaggagtacggcacgccttgctatgtctactcccgcgcagccatggaggccgcgctc
gcccagtatcaccaggctctgaagggctgcgagtaccttgtttgctacgcggtaaaagcc
aactcaaatatagccgtgctcgacacactcgcgcgctgcggcgccggctttgacattgtc
tccgtgggagagttggaacgcgtgcttgcagcgggcggtgacccgggcaaagttgtgttt
tcgggcgttgttaaacggccggatgagatgcgccgggccttacaggtgggtatccgctgc
ttcaacgtcgaatcagcagcagagcttgaagtattgcaatccgttgccgcagaactgaat
gtgcgcgccccggtgtcagtccgcgtcaacccggacgtcgacgccggcacgcacccgtac
atttctaccggattgcgggagaacaagttcggtgttgccacggacgcagccatggcgctt
ttgcgtcgggccaccactatggaaaacatccatatcaccggactggactgccatattggg
tcccaactggtagacatgtctccgctacttgatgcactgcaacaactgctactgatggtc
gatgctcttcaagccgagggtatccatattcgccacctggaccttggcggcggtattgga
gtgcgttaccgggatgaggaacctcccgcggtagccgattatattgccgctgttcgcgaa
gctttgggtgatcgcgatctaggccttgtgttcgaaccgggacgctcaattgtcgctaat
gcgggcgtgctgctaacacgggtgcactacctcaaagaaaccgacgcccacagctttgcc
ctggtcgatgctgcaatgaacgattttatccgccccgcgctgtaccaggcctgggtcgac
attcaagccacgagtcccaacgacgccgagccgcggctttggaatattgtgggtccggta
tgcgaaaccggtgattttcttggcaaggatcgtgaattagctcttgcttcgggcacgctc
ctggcgatacatggggccggagcctacggttttgtaatgagttctaactacaacacccgt
ccccgcgctgcagaagttatgattgatggaaacaagccttatctaatccgagagcgggag
actataggggacctgttacgcggtgagcatcgtctgccacagtga
DBGET
integrated database retrieval system