Congregibacter variabilis: R0135_11500
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Entry
R0135_11500 CDS
T10777
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R0135_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvb03400
]
R0135_11500
Enzymes [BR:
cvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
R0135_11500
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
R0135_11500
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8703
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
WOJ92407
UniProt:
A0ABZ0HYV1
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All DBs
Position
2613494..2614255
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AA seq
253 aa
AA seq
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MRIISFSADGLREAAKRGFYDWLSRQDADFICIQDIRCSEYDLQDDVFFPSDYNAYFFDD
VNGKDNGVAIYCRTLPKAIMTGLGFADFDMQGRYIQADYGELSIGCLLAPVASDCATEEQ
TTKNEFFSLLGAHLEKVRNKRRKFVICGNWRIAHTAADMQNSAENSNRSGFLPEERQWID
ELLDNGYRDAFRQVSTDSDAYTYWPQERGEDGWRIDLQIISEELQYSVEHAAIYTGDSFS
RHAPVIIDYDIDL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcatcagcttcagcgcagatgggttgcgtgaagccgccaaacggggtttttac
gactggctatcccgtcaggacgccgatttcatctgcattcaggatatccgctgttctgaa
tacgacttgcaagatgatgtcttcttccccagcgactacaacgcctacttttttgacgac
gtaaacggtaaagataacggggtcgctatctattgccgcacgctgcccaaggccattatg
actggcctgggttttgcggattttgatatgcagggtcggtacatccaggcggactacggc
gagctttctatcggctgtcttttggcaccggtggccagtgattgcgccactgaagagcaa
acgaccaaaaacgagtttttctctttgctgggcgctcatcttgagaaggtgcgcaacaaa
cgccgcaaattcgtgatctgtggaaactggcgtatcgcccacaccgcagccgacatgcaa
aacagtgccgaaaacagcaatcgctcaggctttcttccagaagaacgtcagtggatagac
gaattgctcgacaatggttatcgagatgcgttccgacaggtgagtactgacagcgatgct
tacacctattggccgcaagaacgtggcgaggacggttggcgaattgacctgcaaatcatc
tctgaagaacttcaatacagcgtagaacacgctgcaatctacaccggcgatagcttctcc
cgccatgcgccggtgatcatagattacgatatcgacctgtaa
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