Congregibacter variabilis: R0135_11605
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Entry
R0135_11605 CDS
T10777
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03420
Nucleotide excision repair
cvb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R0135_11605 (uvrD)
03430 Mismatch repair
R0135_11605 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvb03400
]
R0135_11605 (uvrD)
Enzymes [BR:
cvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R0135_11605 (uvrD)
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R0135_11605 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
R0135_11605 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOJ92428
UniProt:
A0ABZ0HYW3
LinkDB
All DBs
Position
complement(2634340..2636493)
Genome browser
AA seq
717 aa
AA seq
DB search
MDVSDILTGLNDAQRDAVAADSGNMLVLAGAGSGKTRVLVHRIAWLIRAEGLSPHAVLSV
TFTNKAAREMRGRIEHMLQIPTHSMWVGTFHGLAHRLLKTHWKEARLPQNFQILDSDDQL
RLVKRVCRELQLDESRWPPKQAQWYINAQKDEGLRAAHIEPPLGDLYIKTMLRVYAAYEE
ACERGGMVDFAELLLRAHELWLKAPEVLAHYQGRFRQILVDEFQDTNTIQYAWLRVLAGD
QIPVVAVGDDDQSIYGWRGAKIENIQRFGEDFGGTQVVRLEQNYRSTQTILQAANGVIAN
NSGRLGKELWSSGETGDPVQLYAGFNEQDEARFIVEQIESWVNNGQTRRSAAILYRSNAQ
SRVLEEALLRSGLPYRIYGGQRFYERLEIRNAMAYLRLLVSRGDDAAFERVINTPPRGIG
SKTLDILRATARENQISLWQAIQTCQEHKLLPARALTAMDGFRVLVDELDTLTDPMTLEE
LVDQMVRRSGLIAYHEKEKGEKGLARVENLEELVSAARTFVPESDELSPLQQFVDSAALD
AGEGQADPHEDSVQLMTLHSAKGLEFPLVFLAGMEENLFPHRMSIEEPGRLEEERRLCYV
GITRAMERLILTYAESRRLHGSDSYNPPSRFVREIPSELVNEVRLQTKISRPVSQLSGST
PAADTGLNLGQRVYHQMFGEGVVLNFEGRGSNARVEVNFASEGTKWLVVQYAKLQAL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaagtgatattttgacagggttaaacgacgcgcaacgcgacgccgtggcggcg
gacagcggcaatatgttggtgctcgcaggagcggggtcaggaaagacccgtgttttggtg
catcgcattgcctggctcattcgcgccgaaggtttgtcgccccatgcggtgctgtccgtt
acatttaccaataaagcggctcgggagatgcggggacgcatcgaacacatgctgcaaata
cccacgcatagcatgtgggtgggtacgtttcatggtctggctcaccgattactcaagacc
cattggaaagaggctcgccttccccagaactttcagattctcgacagcgatgatcagctc
cggctggtaaagcgggtgtgtagagagctccagctcgatgagtcccggtggccgcccaag
caagcgcagtggtacatcaatgcccagaaggatgagggtcttcgcgcagcgcatattgag
ccgcctttgggtgatttgtatatcaaaaccatgttgcgtgtgtacgcggcttatgaagaa
gcttgcgagcggggcggcatggttgattttgccgagctgctcctgcgagcccacgagctg
tggcttaaagcgccggaggtgctggcgcattatcagggacgctttcgtcagatattggta
gatgagtttcaggataccaacaccattcagtatgcatggctgcgagtcctggcgggtgat
cagatacccgtggttgcggtgggtgatgacgatcagtccatctacggttggcgcggcgcc
aagatcgaaaatattcagcgttttggtgaagactttggcggcactcaggttgtgcgtctg
gagcagaactatcgatccacccagacaattttgcaggccgccaacggcgttattgctaac
aacagtggtcggctgggtaaggagctatggagctctggcgagaccggggacccggtgcag
ctgtacgcgggcttcaatgagcaggacgaggcgcgatttattgttgagcaaatcgaaagc
tgggtgaataacggccagactcgtcgctctgctgcgattttataccgctccaatgcgcaa
tctcgcgttttggaggaggcactattgcgtagtggcctgccctaccgcatttatggcggt
caacgcttctatgaacgtttggaaattcgcaacgccatggcctatttgaggcttctggtc
agtcggggcgacgatgcggcctttgagcgggtgattaatacgccgcccagaggtatcggc
agcaagactctggatatattgcgcgcaaccgcccgagagaaccaaatctcgttgtggcag
gccatacaaacctgccaggagcataaattgcttcccgcccgagcgctaacggccatggac
ggatttcgggtcctggtcgatgaactcgatacgctcaccgatccgatgactctggaggag
ctggtggatcaaatggtgcgccgctcgggtttgatcgcgtatcacgagaaagagaagggt
gaaaaaggcctcgcccgggtagaaaacctcgaagagctggtgagcgctgcgcgaaccttt
gttcccgagagcgacgagctatcgcctttgcagcagtttgtggatagcgcggcactggat
gccggcgaaggtcaggctgatccccacgaagacagcgttcagttaatgactttgcactct
gctaagggcttggagtttcccctggtgtttttagcaggcatggaagagaacctgttcccc
caccgcatgtccattgaggagcccggtcgtctcgaggaagagcgacgtctttgctatgtg
ggtatcacccgggctatggagcgcttgattctcacctacgcggagagccgccgtttacac
ggcagtgacagctataaccccccctcgcggtttgtgcgcgaaataccttctgagctcgtg
aatgaggtgcgattgcagacgaagattagtcgcccggtcagtcagctgtcgggtagcacg
ccagctgcagataccgggcttaatttaggtcagcgggtgtatcaccagatgtttggcgag
ggcgttgtactgaacttcgagggtcggggtagtaacgccagggtagaggttaacttcgcc
tctgaaggaacaaaatggttggtggtgcagtatgcaaaactacaggcgctttag
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