Congregibacter variabilis: R0135_11995
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Entry
R0135_11995 CDS
T10777
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03030
DNA replication
cvb03410
Base excision repair
cvb03420
Nucleotide excision repair
cvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0135_11995 (polA)
03410 Base excision repair
R0135_11995 (polA)
03420 Nucleotide excision repair
R0135_11995 (polA)
03440 Homologous recombination
R0135_11995 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvb03032
]
R0135_11995 (polA)
03400 DNA repair and recombination proteins [BR:
cvb03400
]
R0135_11995 (polA)
Enzymes [BR:
cvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0135_11995 (polA)
DNA replication proteins [BR:
cvb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R0135_11995 (polA)
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R0135_11995 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R0135_11995 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
MqsA_antitoxin
NYN_YacP
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WOJ92502
LinkDB
All DBs
Position
2712993..2715716
Genome browser
AA seq
907 aa
AA seq
DB search
MSEKTPLILVDGSSYLYRAYHALPPLTNSKGLATGAVKGVINMLRRLQKDYPDSTIAVVF
DAKGKTFRDDIYKEYKANRPPMPDDLREQVQPIHDIVRGMGLPLLCEPGVEADDVIGTLA
RQASEDNCPVIVSTGDKDMAQLVNQHITLVNTMNDTRLDPQGVVDKFGIPPELIIDLLAL
MGDKVDNIPGVPGVGEKTALGLLQGLGSLDQIYASLDQVETLSFRGAKTMAAKLEKERDN
AYLSYTLATIATDLELPLVYADLANAPPDNAALLKLFKELEFKGWIDELEGANLTDSAPV
DVDTQEQHYVTVLDQDTLDEWLARLSAAPLFAFDTETTSLNYMEAEIVGVSFAVERGEAA
YVPLAHSYPGAPEQLDRDAVLAALKPLLEDPARAKLGQNLKYDASVLARYDIAMQGIAFD
TMLESYVLDSTGTRHDMDSLALKYLGRSTTHFEDVAGKGAKQITFDKVGIEEAAAYAAED
AEVTLALHQTLWPKLQEIPSLQSVFTDIELPLVSVLSRMERCGALLDEERLWEQSRELGQ
RLQALEEEAHNVAGQVFNLGSPKQLGQILFEKLELPILKKTPKGAPSTAEEVLQELALDY
PLPKLLIEHRGLSKLKSTYTDKLPGMINPHTGRIHTSYHQAVTATGRLSSSDPNLQNIPI
RTEEGRRIRQAFIAAEGYQVVAADYSQIELRIMAHLSEDPGLLAAFRENLDVHSATAAEV
FGVPLDAVSGDQRRKAKAINFGLIYGMSAFGLAKQLHLDRGEAQRYIDVYFERYPGVRQY
MDRTRALAHEQGYVETLFGRRLYLPEINVRNKMRQQAAERTAINAPMQGTAADIIKKAML
SVDKWIADDGVDAKMIMQVHDELVLEVVESQLNPVCDELCRLMSAAADLAVPLLVEAGHG
ANWDEAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagacgcccctgatcctggttgacggttcgtcctacctctatcgcgcctac
cacgcccttccgccgctcacgaactctaagggtctggcgactggcgctgtaaaaggcgtc
atcaatatgctgcgccgtctgcagaaagattatcccgatagcactatcgccgtggtgttt
gatgccaaaggaaagacctttcgcgatgacatctacaaagaatacaaagcgaatcgccca
cccatgcccgatgatctgcgagagcaggtgcagcctatccatgacatcgttcggggcatg
ggtctgccgttgttgtgcgagcccggcgtagaagctgatgatgttatcggtaccctggcg
cgccaggcgagcgaagacaattgtccggtgattgtctctacgggcgataaagatatggct
cagctcgtgaaccagcacatcaccctggtcaataccatgaacgatacgcgcctggatcct
cagggcgtcgtcgataagtttggtattccgccggaactcattatcgatcttctggcactc
atgggcgacaaggtcgataacattcccggtgttcccggcgtcggagagaagaccgcctta
ggtctgctgcagggtcttgggagtttggaccaaatctacgcgtctcttgatcaggtagag
accctgagttttcgaggggccaaaaccatggccgccaaactcgaaaaagaacgggataac
gcctatctctcctacacattggctaccatcgcgacagatctcgaattgcccctggtttat
gctgatcttgcaaacgctccgccagataacgcagcactcctgaagctgtttaaggagctg
gaattcaagggttggatcgatgagctcgagggtgcgaacctcactgacagtgcaccggtg
gacgttgatacacaagagcaacactacgttacggtgttggatcaggatacgttggatgag
tggctggcccgattgtctgcagcaccgctctttgcctttgacacggaaactaccagcctt
aattacatggaagctgaaatcgtcggcgtatcgtttgctgtggaacgcggtgaggccgct
tatgtgccgctcgcacacagttatcccggtgcgccagagcagcttgatcgagatgcggtg
ctggccgcgcttaaaccactgctcgaagatcctgctcgggccaagctcggtcaaaacctt
aaatacgatgccagcgtattggcgcgctacgacatagcgatgcagggtattgcctttgac
accatgcttgagtcttatgtgctcgattccacaggcactcgccatgatatggacagtctc
gcgcttaagtatttaggtcgcagcaccacgcactttgaagatgtagcgggcaagggcgcc
aagcagatcaccttcgacaaagtaggcattgaagaggcggcagcttacgcagccgaagat
gcggaggtgactctggctctgcaccagactttgtggccaaagctccaggaaatacccagt
cttcagagcgtttttacggacattgagttaccgctggtgtcggtactgtctcgcatggag
cgctgtggcgcactcttggacgaggagcgcctctgggagcaaagtcgcgaactcggtcaa
cgactccaggctttggaagaggaagctcacaacgtggctggccaggttttcaacctcggt
tctcccaaacagctcggccagattctgtttgagaagctggagcttcccattctgaaaaag
acgcccaaaggggcgccttcgaccgcagaagaagtgctgcaggaactggcgttggattat
cccctgccaaagttgctcatcgagcatcgcggtttgtccaagctcaagtccacttacacg
gataagcttccagggatgatcaacccgcatactggtcgtattcacacctcttatcatcaa
gccgtgaccgcgacggggcgactgtcttcttctgaccctaaccttcagaacattccgatt
cgcaccgaagaaggtcgcagaatccggcaggcatttatcgctgccgagggctatcaggtc
gtcgcagccgactactcgcagattgaattgcgcatcatggcgcacttgtccgaagaccca
ggattgttggccgcgttccgagagaatctcgatgtgcacagcgccacggctgcagaagtc
tttggcgttcctttggatgctgtgtccggcgaccagcgtcgcaaagccaaggcaatcaac
ttcggattgatctatggaatgtcggcctttggtcttgcgaaacagttgcatctggatcgt
ggcgaggcgcagcgttatatcgacgtgtattttgagcgctatcccggcgtccgccagtat
atggaccgcacgcgcgccctggctcatgagcagggttacgtcgagaccttgtttggacgg
cgtctctatctgccagaaatcaatgtgcgcaataaaatgcgtcagcaagcggctgagcga
accgctatcaacgcccctatgcagggcaccgcagccgatatcatcaaaaaagccatgctt
tcggtggataagtggatcgccgacgatggcgtcgatgcaaagatgatcatgcaggttcac
gacgaattggtgctcgaagtagtcgaatctcaactgaatccagtctgtgatgagctatgc
cgcctgatgtcggcagcagcagatctggccgttccactactggttgaagccgggcacggc
gccaactgggacgaagcgcactaa
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