Congregibacter variabilis: R0135_14915
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Entry
R0135_14915 CDS
T10777
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cvb Congregibacter variabilis
Brite
Enzymes [BR:
cvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
R0135_14915
Transfer RNA biogenesis [BR:
cvb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R0135_14915
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GFIT
Other DBs
NCBI-ProteinID:
WOJ93060
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Position
complement(3350892..3352904)
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AA seq
670 aa
AA seq
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MLDRDALAQLRGLKTQIESEKERTEAVLRGTPARYGFARTDDGREVFVPPDEMLKAFPGD
RVRVCLRPGKDKRPIAEIEGLVESAIGEFTGRCVSKGKAMFVEPDIPGMSRWLFLPPQAR
NGAKSGDYLRCALLRHPIRDGKPQAKVLATIGAADEPGIENLYTMAKYGLEAQWSDADKQ
QLEEVIATLTPENDPGREDFSDLAFVTIDAARTQDIDDALYAEVTSEGWLLYVAIADPTS
YITADSPLRATVAERASSAYFHGAVVPMLPESISQQRCALTENELRPALVCRVAISEDGS
VGEFKFFEAKIRSRAKLSYFAVDRYLSGQDESLICHATPLEALYQVSRALRSRREANELV
MEDRQEFRWLLNERGHIENIEPCEKLSSQRLVEECMVATNRCAAALLSDAGASGPFVVHD
GFRRDRLKDRQKFMELYLTDADALDPDTLEGYRDLLRQLAASDHELPLRSMVNRLLTRAR
LSKKPGAHMGMSLPVYTNCTSPLRKYLDFLVHLQIKAALRGESASICEQPELDKLNQKLQ
KLRQISNEAERWLTLEYLQRKAESAPGPWPGHVSHMGNHGFYVRLDDSGLEGYVDLRKVG
EKFNFDKWTATQKSKTRHFRVNTPVSVTLMGADEETPHLPLFKLDPSCGRKPEKPEEPEE
PALHGEAASQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttagaccgagatgcccttgcccagctacgagggcttaaaacccagatcgaatccgag
aaggagcgaaccgaagcggtgcttcggggaacgcccgcgcgctacggattcgcccgcaca
gacgatggacgcgaagtgtttgttccgccggacgaaatgctcaaggcatttcccggggat
cgcgtgcgtgtctgcctgcgccccggcaaagacaaacgtcccattgcggaaatcgaaggg
ctggtcgaaagcgccattggcgaatttaccggccgctgcgtaagcaaaggcaaggcgatg
ttcgttgagccggatatcccaggcatgagccgttggctgtttttaccgcctcaagcaaga
aacggcgccaagtccggcgactacctgcgttgcgcactgctacgacatcccattcgcgac
ggcaaaccccaagcaaaagtgctggcgaccattggcgccgctgacgaacctggcattgaa
aatctatacaccatggccaaatacggtcttgaagcccaatggtcagatgccgacaagcag
cagcttgaggaagtgatcgcgactttgactccggagaacgatcccggtcgcgaggatttc
tctgaccttgcctttgtcaccatcgatgccgcgcggacccaggacatcgatgatgcgctc
tacgctgaggtcaccagcgagggctggctcctttacgtagccattgctgaccccacctcc
tacataactgcagactcccccttacgggcgactgtggcggagcgcgcaagcagcgcgtat
tttcatggtgccgtggtgcctatgctgcccgaaagtatttctcagcagcgctgcgcactt
accgaaaacgaactgcgacccgccctggtctgcagagttgcgatctcagaagatggcagc
gttggggagttcaagttcttcgaagcaaaaattcgctcccgcgccaagctatcgtatttt
gcagttgatcgatatttgagcggtcaggacgagtcgctgatttgccatgcaacgcccctg
gaggcgctctatcaggtatccagagcgctccggtcgcgacgcgaggccaatgagctggtt
atggaagaccgtcaggagtttcgctggctgctcaatgagcggggacacatcgagaatatc
gaaccttgcgaaaaactgagctcccagcgcctggtcgaagagtgcatggttgccaccaat
cgctgtgcagcggcgttgctttcagacgcgggtgccagcggcccctttgtggtgcacgat
ggttttcgtcgggatcgcctgaaagatcgccaaaagtttatggagctctatctcaccgat
gccgacgctctggatcctgacaccctggagggttatcgagatcttcttcgtcagcttgcg
gccagtgatcacgaattacctctgcgcagtatggtgaatcgtctgctcacccgcgctcgt
ctgtctaaaaaacccggcgcgcacatgggcatgtcccttcccgtctataccaattgcacc
tcgcccttgcgcaagtacctggatttcttggtccacctgcagatcaaggcggctttgcgt
ggcgagagcgcaagcatttgcgaacagccagagctcgacaagctgaaccagaagttgcaa
aaactgcgtcagatcagtaacgaagcggagcgctggctgacgctggagtaccttcagcgc
aaggccgagtccgctcccggcccctggccgggacatgtgtcacacatggggaaccatggc
ttttatgttcgcctggacgacagcggcctggaaggctatgtcgacctgcgcaaagtcggc
gaaaagtttaactttgataagtggaccgctacacagaagagcaaaacccgtcactttaga
gttaacacgccggtgagtgtcacgctcatgggcgctgacgaagaaaccccgcacctgccc
ttgtttaaactcgaccccagctgcggacgaaaaccagaaaagccggaagagccggaagag
ccagcactacacggtgaagctgcgagccaataa
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