Congregibacter variabilis: R0135_15410
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Entry
R0135_15410 CDS
T10777
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cvb Congregibacter variabilis
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvb03400
]
R0135_15410 (radA)
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R0135_15410 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
GvpD_P-loop
Lon_C
AAA_22
Rad51
AAA_16
RecA
ABC_tran
AAA_14
SLFN-g3_helicase
AAA_29
nSTAND3
AAA
NTPase_1
Zeta_toxin
AAA_24
DUF7125
zinc_ribbon_6
KdpD
Motif
Other DBs
NCBI-ProteinID:
WOJ93156
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Position
3474989..3476362
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AA seq
457 aa
AA seq
DB search
MAKAKTAFVCSDCGSDYHKWQGQCSDCGAWNTLSEIRLSGAKGSGRSPAGRSQGFAGELA
PARVLSEIDVSQVQRIPTGMAEFDRVLGGGLVPGSAILLGGNPGAGKSTLLLQACCQLAS
QMSALYVTGEESPQQIAMRAQRLSLPLDQLKLMAETNIEAILAALDAHQPKLLVVDSIQV
VYSEELSSAPGSVSQVRDCAATLTRAAKQRGIVLLLVGHVTKDGSLAGPKVLEHMIDCSV
LLESSDDQRFRTLRGQKNRFGAVNELGIFAMTEQGLREVRNPSAIFLERGEKQSSGSVVM
VVWEGTRPLLVEIQALVDDSPLGNPRRLAVGLEQNRLAMLLAILHRHGGLQVGDQDVFAN
VVGGVRILETSVDLALLLAIVSSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERLAEAAK
HGFVRAIVPRGNAPKTSPPGMQVHAVATLAEALALDL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaaacggccttcgtgtgcagcgattgtggttcggactatcacaagtgg
caggggcagtgcagtgactgcggggcctggaatacgcttagtgagattcgcttaagtggc
gccaaaggctctggacgatctccggcgggccgcagtcagggctttgcaggggaactggcc
ccagctcgggtgctcagcgagattgatgtctcacaagtgcagcgtatccctaccggtatg
gcagaatttgatcgggtgcttggagggggtttggtgccggggtcggccattctcctgggg
ggcaacccgggcgccggaaaaagcacgttgctattgcaggcctgctgccagttagcgagt
caaatgtcggctttgtatgtgacgggtgaggagagccctcagcagatagccatgcgggca
cagcgattgtctctgcctctggatcagctaaaacttatggcagagaccaatattgaggcc
atacttgctgctttagatgctcatcagcccaaattgttggtggtggattccattcaggtg
gtctacagcgaagagcttagctccgcgccgggcagtgtttctcaggtgcgagattgtgca
gccacattgactcgcgccgccaagcagcggggcatcgtcctgttgctggttggtcatgtc
accaaagatggcagtcttgcaggccccaaagtgctggaacacatgattgattgctcggtg
cttcttgagagctctgatgatcagcgttttcgcacactgcgcggacagaagaatcgcttt
ggggcggtgaatgagctgggtatttttgccatgaccgagcaggggcttcgggaagtacga
aacccctcggcaatctttcttgagcgtggcgaaaaacaatcctccgggagtgtggtgatg
gtggtctgggagggcacccggcccctcttggtcgaaattcaggctctggtggacgacagc
cctttgggcaatccgcgtcgtctggcggtcggtttggagcagaatcgacttgccatgttg
ttggcaattttacaccgccatggaggcttgcaggtcggcgatcaggatgtgtttgccaat
gtggttggtggtgtacgcatactcgagaccagtgtcgatctggcgttgctgctggccatt
gtctcgagctttcgagatcgtcctttaccccgggatctggtggtgtttggcgaggtgggc
ctggcaggggagattcgtcccgtgccttcggggcaggagcgtctagcagaggcggccaaa
cacggttttgtccgtgccatagtgccgcggggcaatgcgccaaagacctctccaccaggt
atgcaggttcacgctgtggctacccttgctgaggcgctcgcgctggacttgtag
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