Congregibacter variabilis: R0135_15685
Help
Entry
R0135_15685 CDS
T10777
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03020
RNA polymerase
Brite
Enzymes [BR:
cvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R0135_15685 (rpoC)
Transcription machinery [BR:
cvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R0135_15685 (rpoC)
DNA repair and recombination proteins [BR:
cvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R0135_15685 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOJ93205
LinkDB
All DBs
Position
3528794..3533017
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLNLLKSQGQSDEFDAIRIGLASPDMVRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVTDPGMTTLEHGQLLTDEQYYEAMEEFGDEFTAKM
GAEAVQDLMKQLDLESEIATLREEIPQTNSETKIKKLSKRLKLMEAFASSGNKPEWMVLN
ALPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPA
LRLHQCGLPKKMALELFKPFIFGKLEARGLATTIKAAKKMVEREPPEVWDILAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTIEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRERVNAKGEGRVFADFNEVHRAYLTG
QAHLQARVKVRIHEITITDEGESLERTAVVDTTVGRALLWDIVPKGISYEMVNKPMAKRA
ISQIINQCYRAVGLKATVIFADQLMYTGYEYSTRSGASIGVNDFEIPKEKAELIESADEE
VKEIEEQYAAGLVTQGEKYNKVIDIWSRANDLVSKSMMKGISTEIVKNRDGEDEEQASFN
SVFIYADSGARGSPAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTDHGLLMTPVIDGGDIIETLGDRVL
GRIVAKDVFRPGSDDEIAITAGTMLDELWIRRLEEMGIDELEVRSPITCDTRHGICSTCY
GRDLARGHRVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRATAQDNIQIINDGVVR
LHNVKTVGRKDGTLIAVSRSGELSILDKVGRERERYKLPYGAIIKVADDSPVTAGDIVAT
WDPHTHPIITEVAGTVKFSGMDEGITIRRQTDDLTGLSSIEVMEAGERPAAGKDVRPAIT
LVDDKGEELCLADTNVPAHYFLPALALVGHEDGRKVDAGDVIARIPQEGSKTRDITGGLP
RVADLFEARKPKEPAILAEISGTVSFGKETKGKRRLVITPTDGKPLADGSDHYEALIHKW
RNLSVFEGESVEKGEMISEGPFSPHDILRLKGISELAKYIVNEIQEVYRLQGVKINDKHI
EVIVRQMLRKVVISSSGDSSLIKGEQVEYTRFLEENERLQAEGLVCATGERELLGITKAS
LATESFISAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLTYHENRKKRA
EEESEMTVSAQDIEAALTEALQEESSE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttacttaacctactgaagtcccagggacagtcagatgagttcgatgcgatc
cgcatcggcctggcgtcgccggatatggtccgctcctggtccttcggggaagtgaaaaag
cccgaaaccatcaactaccgtaccttcaagccggaacgggatggtttgttctgcgccaag
atttttggcccggttaaagattacgagtgcctgtgcggaaagtacaagcgtctcaagcac
cgcggtgtgatctgtgagaagtgtggcgtagaagtcgctcttgccaaagttcgtcgtgag
cgcatgggtcacattgagctggcaagccctgttgcgcatatctggtttttgaagtccttg
ccgtcgcgtatcggcctgcttctggatatgacgctacgtgacatcgagcgtgtactgtat
tttgaatcctatgtagtgactgatcccggcatgaccacgctggagcacggtcaactgctg
accgatgagcagtactacgaagccatggaagagtttggcgacgagttcaccgccaagatg
ggcgctgaagctgttcaggatctcatgaagcaactagatctcgagagcgagattgcgacg
ctgcgtgaagagattccccagacgaactctgagaccaagatcaagaagctgtccaagcga
ctcaagttgatggaagcttttgcaagctccggcaacaagcctgagtggatggtgcttaac
gcactgccagtgctgccgccggatcttcgtccgctggttcctctggatggcggtcgtttt
gcaacatcagatcttaacgacctttatcgccgggtgatcaaccgtaacaaccgtctcaag
cgtcttttggatctgaacgcgccggacatcatcgtgcgtaacgaaaagcgcatgctgcag
gaatctgtggatgcgctgctggacaacggtcgtcgtggtcgggccatcacaggctccaac
aagcgtcctctgaagtctcttgcggacatgatcaagggtaagcagggtcgtttccgtcag
aaccttctcggtaagcgtgttgactactcaggccgttcagtgatcgtggttggtcctgct
ctgcgtctgcatcagtgtggtcttcccaagaagatggctctggagctgttcaagccgttt
atttttggcaagcttgaagcacgcggtctggcgacaacaatcaaagccgccaagaagatg
gtcgagcgcgagccaccagaagtgtgggatatcctcgctgaagtgattcgcgagcacccc
gtgctgcttaaccgtgcgccaactctccaccgtcttggtatccaggcttttgagccggtt
ctcattgaaggtaaggcgattcagctgcacccattggtttgtgctgcctacaacgctgac
ttcgacggcgaccagatggctgtgcacgttccattgactatcgaagcacagcttgaagct
cgtgcattgatgatgtctaccaacaacatcctgtcacctgcgagcggtgagccgatcatc
gttccttctcaggacgttgttttgggtctgtactacatgactcgcgaacgcgttaatgcc
aagggcgaaggtcgtgtatttgctgactttaacgaggtgcatcgcgcctatctgacgggg
caagcgcaccttcaggcacgagttaaagttcgcatccacgagataaccattaccgacgaa
ggcgagagcctggagcgtacagcggttgtagatactaccgttggtcgtgcgctgctttgg
gacatcgtgcccaagggtatctcctatgagatggttaacaagccgatggcgaagcgcgct
atttcgcagatcattaaccagtgctaccgcgcagtgggcttgaaagcgacggttatcttc
gccgatcagctgatgtacaccggctacgagtactcaactcgctcgggcgcgtcgattggt
gtgaacgactttgagattcctaaagagaaagctgaactcatcgagagcgctgatgaggaa
gtgaaggaaatcgaggagcagtacgctgctggtctcgtgactcaaggcgagaagtacaac
aaggttatcgatatttggtctcgcgcgaatgacttggtgtccaagtccatgatgaagggc
atctctaccgagatcgtcaaaaatcgtgacggcgaagacgaagagcaagcctccttcaac
tccgtgtttatctatgcggattctggagctcgaggctccccggcacagattcgtcagctc
gcgggtatgcgtggtctgatggccaagccggatggctcgatcattgaaacacctattaca
gctaacttccgtgaaggtctgaacgtacttcagtactttatctctactcacggtgctcgt
aagggtctggcagatacggcactgaagacagcgaactcgggttacctgactcgtcgtctt
gtcgatgttgcgcaggatctggttgtgaccgaggtggattgtggtacggatcacggtctt
ctgatgacgcccgtcatcgatggtggtgacatcatcgagacactgggtgatcgcgtattg
ggtcgtatcgtggccaaagacgtgttccgtcctggttctgatgacgagatcgccattact
gcgggcaccatgctcgatgagctttggattcgccgtctggaagaaatgggtatcgatgag
cttgaagttcgctcaccgattacctgcgacacgcgccatggtatctgttcaacctgttac
ggccgtgatctggctcgaggccatcgcgtcaacatgggtgaggcagtcggtgttgtagcg
gctcagtctattggtgagccgggtacacagctcaccatgcgtaccttccacattggtgga
gcggcatcgcgggctactgctcaggacaacattcagattattaacgatggtgtggtgcgt
ttgcacaacgttaagactgttggacgtaaggacggcactttgatcgccgtttctcgttct
ggtgagctttcgattcttgataaagttggacgtgagcgcgagcgctacaagcttccttac
ggcgcgatcatcaaggttgcagacgatagcccagttaccgctggtgatattgtcgctacc
tgggatccgcacactcacccaatcatcactgaggtggccggtaccgttaagttcagcggt
atggacgaaggcattaccattcgccgccagactgacgacctcacaggtttgtcgagcatc
gaagtcatggaagcgggcgaacgtcctgcggcaggcaaagatgtgcgtccggcgatcaca
ctggtcgatgacaagggcgaagagctgtgtcttgcagataccaacgtacctgcgcactac
ttcctgcctgcgctcgcactggtcggccatgaagacggccgtaaggtagatgctggtgac
gttattgcacgtattccgcaagaaggctcaaagactcgcgatatcacgggtggtctgccg
cgtgttgctgacctgttcgaagctcgtaagccaaaagagcctgcaatccttgcagagatc
tcaggcacggtaagctttggtaaagagaccaagggtaagcgtcgtctggtgattacaccg
accgatggcaagcctttggctgatgggtcggatcactacgaagcgctgattcacaagtgg
cgtaacctctcagtgtttgagggtgagtcggttgagaagggcgagatgatctccgaaggg
ccgttcagtcctcacgatatcctgcgcttaaagggtatctccgagttggcgaagtacatc
gtcaacgaaattcaggaggtttaccgactgcagggcgtgaagatcaacgacaagcacatc
gaagttattgttcgtcagatgctgcgtaaagttgttatttcttcttccggtgattcatcg
cttatcaaaggcgaacaggtggaatacacgcgattcctcgaagagaacgagcgtctgcag
gcggaaggtcttgtttgtgcaaccggcgagcgtgagcttctgggtatcaccaaggcgtct
cttgccaccgagagcttcatctcggctgcttccttccaggagaccactcgtgttctcacc
gaggctgcagtgaccggtaagcgcgactatcttcgtggtttgaaggaaaacgtggttgta
ggtcgcctgattcctgcgggaactggtttgacgtatcacgagaaccgcaagaagcgcgca
gaggaagagagcgaaatgactgtttcggcgcaagacatcgaagcagctttgacagaagca
ctgcaggaagaaagctcagagtaa
DBGET
integrated database retrieval system
