Congregibacter variabilis: R0135_16390
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Entry
R0135_16390 CDS
T10777
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cvb Congregibacter variabilis
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvb03009
]
R0135_16390
Enzymes [BR:
cvb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
R0135_16390
Ribosome biogenesis [BR:
cvb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R0135_16390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
FtsJ
Cons_hypoth95
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WOJ93343
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Position
complement(3655873..3657093)
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AA seq
406 aa
AA seq
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MPLFKKSLRASPKGTKGPKGPKKHDTGLRPGHRFEGEVRDLSSDGQGVVAHPDGRVFFVP
GVWRDERGLFEVTSLKGRMGFARVISLSEESAQRRTPPCPHHGFSNDSCGGCPWLFMDYQ
EQLQSKQQQLLRMLQPLNTALAISPVWASPEELGYRNRAQLKSDGKRLGYVAGNSRDIAQ
ISDCLVLNTKNRKTLADLRAQLPNPSWKPGRGKHWTTLDIDDDINASQVAVNDRRPFRQG
NSAQNQRMREWLLSQLHNMSARSPVVELFAGSGNFTEVLVDAGCESVCAVDSFRQAIDGL
QARLLPGVTGICSNLERDGSASDIEAQLSTAKLLLLDPPREGLKNIGDYLTLAPQLRTII
YISCNLATLSRDLQTAMQHKFQLQEVQPLDLFPQTPQIEVLTVLSR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccattgttcaaaaaatcgttacgcgcaagccccaagggaacaaagggacccaagggg
ccgaagaagcacgataccgggctccggcccggtcatcgcttcgaaggcgaagtacgcgac
ctcagtagcgacggccaaggtgtagtcgcacatcctgatggtcgcgtcttttttgtgccg
ggagtttggcgggacgagcgaggactgtttgaagtcaccagcctcaaggggcgtatgggc
tttgccagggtaatttcgcttagcgaagaatctgcgcaacgccgaacgccgccttgccct
caccatggttttagcaacgatagctgcggaggttgcccctggttgtttatggattaccag
gagcaactgcaaagcaaacaacagcaactgcttcgcatgctccagcccttgaataccgcc
ttggcgatatcacccgtttgggcgtccccggaagaactgggttatcgcaaccgcgcgcaa
ttaaaatcagatggtaaacgcttgggttatgtcgcaggaaactcccgagacattgcacag
atcagcgattgcctggtgctcaacaccaaaaaccgaaaaaccctggccgacttacgtgcg
cagcttcccaacccatcctggaagccggggcgtggaaagcattggacaacgctggatatt
gacgacgatattaatgcatcccaggtggcggtgaatgatcgtcggccttttcgccaaggc
aacagcgcgcaaaatcagcgcatgcgggaatggttgctcagccagcttcacaacatgtcg
gcgaggtcgccggtggtagagctttttgcggggtccggaaactttaccgaggttctagtc
gatgcaggctgcgaatctgtctgtgcagtggacagcttccgccaagccatcgacggactg
caggcgcgattgcttccgggagtcaccgggatttgcagtaaccttgaaagagacggcagc
gcgtctgatattgaagcacagctatccaccgcgaaactgttacttttggaccctccccgg
gaaggcctaaaaaacataggcgattatctgacactggcgccccaactacgcaccattatt
tacatctcatgtaatcttgcgacgcttagccgggaccttcagacagctatgcagcacaaa
tttcagttgcaggaggttcagccgctggacctgtttccacagactccacaaatcgaagta
ttgacggttcttagccgctag
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