Congregibacter variabilis: R0135_16930
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Entry
R0135_16930 CDS
T10777
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cvb Congregibacter variabilis
Pathway
cvb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0135_16930 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvb03019
]
R0135_16930 (groL)
03110 Chaperones and folding catalysts [BR:
cvb03110
]
R0135_16930 (groL)
03029 Mitochondrial biogenesis [BR:
cvb03029
]
R0135_16930 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvb04147
]
R0135_16930 (groL)
Enzymes [BR:
cvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R0135_16930 (groL)
Messenger RNA biogenesis [BR:
cvb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R0135_16930 (groL)
Chaperones and folding catalysts [BR:
cvb03110
]
Heat shock proteins
HSP60 / Chaperonin
R0135_16930 (groL)
Mitochondrial biogenesis [BR:
cvb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R0135_16930 (groL)
Exosome [BR:
cvb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R0135_16930 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R0135_16930 (groL)
Exosomal proteins of breast cancer cells
R0135_16930 (groL)
Exosomal proteins of colorectal cancer cells
R0135_16930 (groL)
Exosomal proteins of bladder cancer cells
R0135_16930 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
WOJ93448
LinkDB
All DBs
Position
3789868..3791514
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVFFADEGRHRMLAGVNILADAVKATLGPKGRNVIIEKSFGAPTVTKDGVSVAKEI
ELKDRFENMGAQMVKEVASQASDVAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVAQVQAASIPCEDNKAIAQVGTISANSDYAVGEIIADAMDKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFITNQDSMSVDTDSPFILLVDKKISNIRELLPLLEQV
AKASKPLVIVAEDVEGEALATLVVNNMRGIVKVAACKAPGFGDRRKAMLQDIAILTGATV
ISEEVGLELENATLEHLGNAKRFTMDKDNSTIIDGAGEAAAIEARVKEIRVQIENTSSDY
DREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAIAAIADLKGDNEDQNIGIAAALRAMEAPMRQIVGNAGDEASVVLDKVRQGEGNFGYNA
ATGEYGDMIEMGILDPAKVTRAALQAAGSVAGLMITTEVMIADSPDDSAAAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttttttttgctgacgaaggccggcatcgcatgcttgccggcgta
aacattctcgcagatgccgttaaggcaaccttggggcccaagggccgcaacgtaatcatc
gagaaatccttcggtgcacctaccgtaacaaaagatggtgtttccgttgcgaaagaaatc
gaactcaaagatcgctttgagaacatgggcgcacagatggtcaaggaagttgcttcccag
gcctctgacgttgctggtgacggcacaactactgccacagtactggcacaggctatcgtg
aatgagggtttaaaggctgttgcggcaggcatgaaccccatggatcttaagcgcggtatt
gataaggctgttgccgctgcggtagcgcaggttcaggcggcttcaattccttgcgaagac
aataaggccattgcgcaggtcggcactatctcagctaactctgactatgcagtcggcgaa
atcatcgctgatgccatggacaaagtcggcaaagaaggcgtgatcacggttgaagagggc
tctggcctcgagaacgaactcgacgtggttgaaggcatgcagtttgatcgcggctacctt
tcgccatacttcatcaccaatcaggacagcatgagcgttgacactgacagcccattcatc
ctgcttgtagacaagaagatctccaacatccgtgaattgcttcctttactggagcaggta
gccaaggcgtccaagccactggttatcgttgcagaagatgttgaaggcgaagcgttggcg
accctggttgtcaacaacatgcgtggcattgtaaaagttgccgcctgtaaggcgcctggt
tttggtgatcgtcgtaaggctatgttgcaggatatcgctatcctcaccggcgcgactgtt
atctctgaggaagttggtctggagttggaaaacgcgactctcgagcacctgggtaacgcc
aagcgcttcactatggacaaggacaacagcacgatcatcgatggagccggcgaagccgct
gccattgaagctcgcgtaaaagagatccgcgttcagatcgaaaacacttcttctgattac
gatcgcgagaagctgcaggagcgtgttgccaagctggctggcggtgttgcggtaatcaag
gttggcgctgccaccgagatcgagatgaaagagaagaaagcccgcgttgaagatgcactg
catgctacccgtgcagctgtggaagaaggcgtagttgctggcggtggtgtagctctggtt
cgcgccattgctgctatcgcagaccttaagggtgacaacgaagatcagaacattggtatt
gctgcggcactgcgtgccatggaagcacccatgcgtcagatcgtcggcaacgctggcgac
gaagcctctgttgttctcgacaaggtacgtcaaggcgaaggtaacttcggctacaacgct
gcgactggcgagtacggtgacatgatcgagatgggtattcttgatccagccaaagtaact
cgcgcagcattgcaggctgctggctctgtggccggcctgatgatcaccactgaggtgatg
attgctgactcgccagacgatagtgcggctgcaggcggcggtatgcctgatatgggcggc
atgggtggcatgggcggcatgatgtaa
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