Congregibacter variabilis: R0135_17025
Help
Entry
R0135_17025 CDS
T10777
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cvb Congregibacter variabilis
Pathway
cvb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R0135_17025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cvb02022
]
R0135_17025
02035 Bacterial motility proteins [BR:
cvb02035
]
R0135_17025
Two-component system [BR:
cvb02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
R0135_17025
Bacterial motility proteins [BR:
cvb02035
]
Pilus system
Twitching motility proteins
R0135_17025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
HTH_50
AAA_16
HTH_28
HTH_24
PG_1098_Fer
Motif
Other DBs
NCBI-ProteinID:
WOJ93467
UniProt:
A0ABZ0I333
LinkDB
All DBs
Position
complement(3814017..3815390)
Genome browser
AA seq
457 aa
AA seq
DB search
MSANQPARVLIVDDEPDIRELLEITLGRMGLDTVSAATLGEAYELLDDESTLQLCLTDMR
LPDGNGIDLVEHIQATQPSLPVAMITAHGNVDSAIRALKAGAFDFISKPVALEKLRSLIS
AALELEPIESITGAPATDELIGNTDAMLRLRKQIDKLARSQAPVHIRGESGSGKEVVARN
IHGRGPRAAGPFVAVNCGAIPAELIESELFGHLKGSFTGASRDKLGLFQAAEGGTLFLDE
VADLPLAMQVKLLRAIQEKRVRPVGANEEVATDVRLLSATHKSLAKEVADGRFREDLFFR
VNVIELEVPSLRERKNDIAVLANALIKRIAEAHHSETPKISDAALSTMESYAFPGNVREL
ENMLERAFALCEGEVITTEDLQLGSIETLAPTPENHTQGAGLDAVAGDLDAYLADIERGI
LSEALDAHRWNRTETAKALGVSFRSLRYRMKKLQLDD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgccaatcaaccagcccgagtactcatcgtcgatgatgaacctgatattcgtgag
ctactggaaattacgctcggacgtatgggcctggacaccgtgagcgctgccacattaggc
gaagcctacgaactgctggacgacgaaagcaccttgcagctgtgcctgaccgacatgcgg
cttccagacggcaatggtatcgatctggtggaacacattcaggctacgcaaccctccctt
cccgtggccatgattacggcacatggcaatgtcgatagcgccattcgtgcgctcaaggct
ggcgccttcgatttcatcagtaaacccgtagcgctggaaaaacttcgctctttgatcagc
gcggccctggagcttgagcccatcgagtcaatcacgggggctccagccaccgatgagctc
atcggtaataccgatgcgatgctccggctgcgcaaacagattgacaagcttgctagaagc
caggcgcccgtgcacatccgcggagaatcgggaagcggtaaagaggtcgtggcgcggaat
attcatggtcgcggcccgcgcgctgccggcccctttgtggcggtcaactgtggagcgata
cccgctgaactcattgagagcgaactgtttggccatctcaaggggagctttactggcgcg
agtcgcgacaagctcggactctttcaagccgcagaaggaggaacgctgtttcttgatgaa
gtcgcggacctacccctggcgatgcaggtcaagttgttacgcgccattcaggagaagcgc
gtacgcccggtgggtgcgaacgaagaagtggctaccgatgtgcgtttactgtctgccact
cacaagagtctcgccaaggaagtcgccgacggccgctttcgcgaagatctgttctttaga
gtaaacgtgatcgaacttgaagtacccagcctacgggagcggaaaaacgacatcgcagta
ctcgcaaatgcgctgataaagcgcattgcggaggctcaccatagcgagactcccaagatc
agcgacgccgcactttcaaccatggaaagctatgcatttcccggtaacgtgcgtgaactg
gaaaacatgttggagcgtgcctttgctctgtgtgagggcgaagtgataaccacggaggac
ctccaattaggcagtattgaaacacttgccccaacgccagagaatcacacacaaggtgcc
ggcctcgatgcggtcgccggcgatctagatgcttatctagccgacattgaacggggaata
ctcagcgaggcactcgatgctcaccgctggaatcgtacagaaacagccaaggcactagga
gtaagcttccgcagtcttcggtatcgaatgaagaaactccagctagatgattaa
DBGET
integrated database retrieval system
