Congregibacter variabilis: R0135_17175
Help
Entry
R0135_17175 CDS
T10777
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00900
Terpenoid backbone biosynthesis
cvb01100
Metabolic pathways
cvb01110
Biosynthesis of secondary metabolites
Module
cvb_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
R0135_17175
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cvb01006
]
R0135_17175
Enzymes [BR:
cvb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
R0135_17175
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
R0135_17175
2.5.1.29 geranylgeranyl diphosphate synthase
R0135_17175
Prenyltransferases [BR:
cvb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
R0135_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WOJ93489
LinkDB
All DBs
Position
3849997..3850869
Genome browser
AA seq
290 aa
AA seq
DB search
MPLGDSDFEQVLRSAVAEAADARCPKRLAAALQHAVFPGGARVRPKLCLAVALANNCDAP
ALAAAAAASVELLHCASLVHDDMPCFDNADERRGRESVHSAFGEPIALLAGDALIVSAFA
LLARPQLPAKNRLSQLLRVVAEGVGAPCGIAAGQAWESEPVVDVSLYHRSKTGALFIAAT
AAGAAAAGVDVAPWRDLGAKIGEAYQVADDIQDATSTPEQLGKPCGVDAALQRPSAVSEL
GLEGATRRLRELVEEGVVAVPACAGRAELQEVVRQQAQRFLPQACAVVAA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaggtgacagtgattttgagcaggtgctgcgctccgcggtagcagaggcagca
gatgcgcgctgcccgaagcgcttagcagcggcgttgcagcatgcggtgtttcccggaggc
gccagggttcgtcccaagctttgtcttgcggttgccttggcgaacaactgtgacgcgccg
gcacttgccgcagccgctgcagcgtccgtggagttgctgcactgcgcctctcttgttcat
gatgatatgccttgctttgataacgcggatgagcgtcgtggtcgcgagtctgtgcattcg
gcttttggtgagcctattgctttgctggcgggtgatgccttgattgtgtcggcgttcgct
ttgctggccaggccgcagcttcctgcaaaaaaccgtctctcgcagttgctccgggtggtg
gcagagggagtcggtgctccttgcggtattgcggcaggtcaggcctgggagtccgagcct
gtggtcgacgtatctctttaccatcgctctaaaaccggcgccctgttcattgctgcgaca
gcggctggcgctgcggctgcgggggtcgatgtcgcaccctggcgagacctgggtgccaag
atcggtgaggcgtatcaggttgccgacgatattcaggatgcgacttcaactccagagcag
ttgggcaagccttgcggcgtggatgccgctcttcagcgccccagtgctgtctctgagttg
ggtctggagggcgcaacacgccgcttgcgggaattagtggaagagggtgttgttgcagtg
ccggcctgtgcgggacgtgcagagcttcaagaggtggtgcgccagcaggcgcagcgattt
ctgccccaggcctgcgctgtggtggcagcctga
DBGET
integrated database retrieval system
