Congregibacter variabilis: R0135_17560
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Entry
R0135_17560 CDS
T10777
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00300
Lysine biosynthesis
cvb01100
Metabolic pathways
cvb01120
Microbial metabolism in diverse environments
cvb01230
Biosynthesis of amino acids
Module
cvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R0135_17560 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvb01002
]
R0135_17560 (dapE)
Enzymes [BR:
cvb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
R0135_17560 (dapE)
Peptidases and inhibitors [BR:
cvb01002
]
Metallo peptidases
Family M20
R0135_17560 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WOJ93564
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Position
complement(3928265..3929404)
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AA seq
379 aa
AA seq
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MTDTDRTLDLACELIARASVTPEDAGCQALMMQRLEALGFHCTPLPFEDTQNFWAQWGTS
GPLLAFAGHTDVVPPGPASEWDSDPFVPTVRDGLLYGRGAADMKGSLAAMIVACEDFLAK
RKPQGSIGFLITSDEEGPATNGTVRVMQWLAERGINIDYCVVGEPSSSEALGDTIKNGRR
GSLNAELKIHGRQGHVAYPQHADNPLHGALPALGELITRQWDQGNEYFPATSFQITNLHT
GTGATNVIPGHVDLLLNFRFSTEQTSNSLQEAVEKTLADHSVKADIQWKLSGDPFITAEG
ELTNACRAAVLEVTGIETQLSTSGGTSDGRFIAPYGAQLVELGPINASIHRVNEHVRVDD
LPKLAAMYEGILRRLLPEN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacagataccgatcgtactttggacctggcctgcgagctcatcgcccgggcttctgtc
acgccagaagatgcaggatgccaagcattgatgatgcagaggttagaggccctgggcttt
cactgcacccccctgccctttgaggacacacaaaacttttgggcccagtggggaacaagc
ggtccgcttctggcattcgcaggacatacggacgtagtgccacccggaccggcaagtgaa
tgggacagcgacccatttgttcccaccgttcgcgacggactgctatacgggcgaggcgcc
gccgacatgaaaggcagcctcgctgcaatgattgttgcctgtgaagatttcctcgcaaag
cgcaagcctcagggaagcattggctttcttataacctcagatgaagagggccccgcaaca
aacggcacggtgcgagtcatgcaatggttagccgaacgcggcattaacatcgactattgt
gtagtaggtgagccttcgagtagcgaagcgcttggggacaccatcaaaaacggccgccgg
ggctcccttaacgccgagctcaagatacacgggcgtcaggggcatgtggcgtaccctcaa
catgccgataatccactacacggggcacttccggcgctcggggaactgatcaccaggcag
tgggatcagggtaacgagtacttcccggcgaccagcttccagatcactaatttgcacacg
ggcaccggcgcaacaaatgtgattcccgggcacgtcgatttgttgcttaactttcgcttt
tctacagaacagacgtcaaacagcctgcaagaggccgtcgagaagactctggcggatcac
tcagtcaaagcagacattcaatggaagctcagcggagatccgtttatcaccgctgaaggc
gagctcaccaacgcctgtcgcgccgctgtgttggaagttacgggtatagaaacacagctg
tccaccagcggcggcacctccgacggtcgctttatagcgccctatggcgcccagctcgtg
gagttgggccccatcaacgcaagcatccatcgtgtcaatgagcatgttcgcgtcgatgac
cttccaaagcttgctgctatgtacgaaggtattctccggcgcttactccccgaaaattaa
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