Chromobacterium vaccinii: BKX93_08160
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Entry
BKX93_08160 CDS
T04565
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cvc
Chromobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvc03400
]
BKX93_08160
Enzymes [BR:
cvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BKX93_08160
DNA repair and recombination proteins [BR:
cvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BKX93_08160
Prokaryotic type
BKX93_08160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOZ49975
UniProt:
A0A1D9LFJ7
LinkDB
All DBs
Position
complement(1772651..1774066)
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AA seq
471 aa
AA seq
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MSKRYRTALVWLRRDLRLDDHAAFYHALKHGEAVLPVFVFDAAILDALPRDDRRIDFIHQ
SVAALKADLNALGGDLLVRHGLPVDEIPRLAAELGADAVFCNRDYEPAARERDAEVAGRL
AERGIAFHDSKDQVIFETDEVLTGAGKPFAVFTPYKNAWLKKLTPFHLQAYPVRRYLDAL
MPREAEPMPSLADIGFMPSDLASLPVKAGAAGAEALFADFAGRIERYKTQRDFPGVKGVS
YLSVHLRFGTISIRQLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDVVAHAFKPEY
DALPFPNDSEWFDAWREGRTGYPLVDAAMRQLNRSGYMHNRLRMVAASFLVKDLLIDWRW
GEQYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDPDGRFIRRYVPE
LARLPDKLIHAPWLAKPEQLADAGVWLGRDYPLPAVDHAVQRELALALFKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgctaccggacggcgctggtctggctgcgccgcgatctgcggctggacgac
cacgccgccttctaccacgcgttgaagcatggcgaggcggtgctgcctgtgttcgtgttc
gacgccgccattctggacgcgctgccgcgcgatgaccgccgcatcgatttcatccatcaa
agcgtcgcggccttgaaggcggatttgaacgcgttgggcggcgatctgctggtccgccat
gggctgcctgtcgacgagattccgcggctggcggcggagctgggcgccgacgcggtgttc
tgcaaccgcgattacgaaccggccgcccgcgagcgcgacgccgaagtggcggggcggctg
gccgagcgcggcatcgccttccatgacagcaaagatcaggtgattttcgagaccgacgaa
gtcctgaccggcgccggcaagccgttcgcggtgttcacgccgtacaagaacgcctggctg
aagaaactgacgccgttccacctgcaggcctatcccgtgcggcgctatctggacgcgctg
atgccgcgcgaagcggaacccatgcccagcctggccgatatcggtttcatgcccagcgat
ctggcttcgttgccggtcaaggccggcgcggccggggccgaggcgctgttcgccgatttc
gccggccgcatcgagcgctacaagacgcagcgcgactttcccggcgtcaagggcgtgtcc
tatctcagcgtccatctgcgcttcggcaccatttccatccgccagttggccgcctatgcc
tggcacgacggcggcgagggagcgatgacctggctgagcgagctgatctggcgcgatttc
taccagcaagtgctgtggcaccggccggacgtggtggcgcacgcgttcaagccggagtac
gacgcgctgcctttccccaatgactctgaatggttcgatgcctggcgcgagggccgcacc
ggctatccgctggtggacgcggcgatgcgccagctgaaccgcagcggctacatgcacaac
cgcttgcgcatggtggcggccagcttcctggtcaaggatctgctgatcgactggcgctgg
ggagagcagtacttcgccgagaaactgctggatttcgatctggccgccaacaacggcggc
tggcagtgggcggccagcaccggctgcgacgcccagccttacttccgcattttcaatccg
gtcagccagagcgagaagttcgatccggacggccgcttcatccgccgctacgtgccggag
ctggcgcggctgccggacaagctgatccacgcgccgtggctggccaagccggagcaactg
gcggacgccggcgtatggctgggacgcgactacccgctgccggcggtcgaccacgcggtt
cagcgcgaattggcgctggccttgttcaagcgttga
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