KEGG   Chromobacterium vaccinii: BKX93_08495
Entry
BKX93_08495       CDS       T04565                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cvc  Chromobacterium vaccinii
Pathway
cvc02024  Quorum sensing
cvc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BKX93_08495
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BKX93_08495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvc03019]
    BKX93_08495
   03036 Chromosome and associated proteins [BR:cvc03036]
    BKX93_08495
Messenger RNA biogenesis [BR:cvc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BKX93_08495
Chromosome and associated proteins [BR:cvc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BKX93_08495
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AOZ50026
UniProt: A0A1D9LFI1
LinkDB
Position
complement(1846587..1846847)
AA seq 86 aa
MSSKGQMLQDPFLNILRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLKNTVTQMVYKHAI
STVVPARPVNIPHEHPAQKQEQAQDA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagctctaaagggcaaatgttacaagaccccttcctgaatatcctgcgcaaggaacac
gtgccggtttccatttatctggttaacggcatcaagctgcaaggtcaggttgaatctttc
gaccaatacgtcgttctgttgaagaacacggtgacgcagatggtttacaagcacgccatc
tccaccgtggttccggcccgcccggtcaacatcccgcacgagcacccggcgcaaaagcag
gaacaggcgcaggacgcttaa

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