Chromobacterium vaccinii: BKX93_14395
Help
Entry
BKX93_14395 CDS
T04565
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cvc
Chromobacterium vaccinii
Pathway
cvc03420
Nucleotide excision repair
cvc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKX93_14395
03430 Mismatch repair
BKX93_14395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvc03400
]
BKX93_14395
Enzymes [BR:
cvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKX93_14395
DNA repair and recombination proteins [BR:
cvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKX93_14395
MMR (mismatch excision repair)
Other MMR factors
BKX93_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
RskA_C
Motif
Other DBs
NCBI-ProteinID:
AOZ51064
UniProt:
A0A1D9LIQ1
LinkDB
All DBs
Position
complement(3107542..3109683)
Genome browser
AA seq
713 aa
AA seq
DB search
MSDLLAGLNPEQLRAVTWPAKSALVLAGAGSGKTRVLTTRIAWLLSTGQTSPAGVLAVTF
TNKASREMQTRLSTLVPVNVRNMWIGTFHGLCNRFLRIHYRDAGLPQTFQILDSADQQAA
IKRLLKSLELSDEKYPPRAVQSFINGNKEAGVRAESLPPALNPYEAKLMELYAAYDAQCR
REGVVDFAELLLRSYELLSRNEALRAHYSSRFAHILVDEFQDTNRLQYAWLKLLAGEHGA
LFAVGDDDQSIYAFRGAEVGNMRALLSDFQVAEPVRLEQNYRSMGNILNAANALIERNDG
RLGKNLWTDAGEGEKIRFYQAGSDGDEAEFIIDEVKSLHREGLALSDMAVLYRSNAQSRL
LEHVLVNAQIPYRIYGGLRFFERQEIKHALAYLRLVANPDDDNALLRVINVPARGIGARS
VENLQAAGREQGISLWQAACGAGSGRTAAKIGEFVLLIERLREQSRDFSLAETISLVIDR
SGLRDMYEQDKKDGEERLANLDELVNAAASFMPDQPEQALTEFLSAASLEAGEHQADAGS
DALQLMTVHAAKGLEFDAVFVSGLEEGLFPHENSVMDGKGLQEERRLMYVAITRARKRLY
LSSAQSRMLHGQSRYPIPSRFIDEIPAELIHSLSATVKAPVAPQQARRSAAMPRRQAENA
YGLSIGQAVSHAKFGIGVVIDAEGNGEDVRLQINFAEHGVKWLDMRYAKLSPA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctgttagccggcctgaatcccgaacaactgcgcgccgtcacctggcccgcc
aagagcgcgctggtgctggccggcgccggcagcggcaagacccgggtgctgaccacccgc
atcgcttggctgctgtccaccggccagacctcgccggccggggtgctggcggtcaccttc
accaacaaggcctcgcgcgagatgcagacgcggctgtcgacgctggtgccggtcaatgtg
cgcaatatgtggatcggcaccttccacggcctgtgcaaccgcttcctgcgcatccactac
cgggacgccggcctgccgcaaaccttccagatcctcgactccgccgaccagcaggccgcg
atcaagcgcctgctgaaaagcctggagctatcggacgagaaataccctccgcgcgcggtg
caatcgttcatcaacggcaacaaggaggccggcgtgcgcgccgaatcgctgccgccggcg
ttgaacccgtacgaagccaagctgatggagctgtacgccgcctacgacgcccagtgccgg
cgcgagggcgtggtcgacttcgccgagctgctgctcagaagctacgagctgctgtcccgc
aacgaggcgctgcgcgcgcattacagcagccgcttcgcccacatcctggtggacgagttc
caggacaccaaccgcctgcaatacgcgtggttgaaactgctggccggcgagcacggcgcg
ctgttcgccgtcggcgacgacgaccagagcatctacgccttccgcggcgccgaagtcggc
aatatgcgcgcgctgctgtccgacttccaggtagccgagccggtgcggctggagcagaac
tatcgctcgatgggtaacatcctcaacgccgccaacgcgctgatcgaacggaacgacggc
cgcctgggcaagaacctgtggaccgacgccggcgagggcgaaaagatccgtttctaccag
gccggcagcgacggcgacgaggctgaattcatcatcgatgaggtcaagagcctgcaccgc
gaaggcctggcgctatccgacatggcggtgctgtaccgctccaacgcccagtcgcggctg
ctggagcacgtgctggtcaacgcccagattccgtaccggatctacggcggcctgcgcttc
ttcgaacgccaggagatcaagcacgcgctggcctacctcaggctggtcgccaacccggat
gacgacaacgcgctgcttagggtgatcaacgtgccggcgcgcggcatcggcgcgcgcagc
gtggaaaacctgcaggccgccggccgcgagcagggcatctcgctgtggcaggccgcctgc
ggcgccggcagcggccgcaccgccgccaagatcggcgagttcgtgctgctgatcgagcgg
ctgcgcgagcagagccgcgacttcagcctggccgaaaccatcagcctggtgatagaccgc
agcggcctgcgcgacatgtacgagcaggacaagaaggacggcgaggagcggctggccaac
ctggacgaactggtcaacgccgccgccagcttcatgcccgaccagccggaacaggccctg
accgaattcctgtccgccgccagcctggaagccggcgagcaccaggccgacgccggcagc
gacgcgctgcagctgatgacggtgcacgcggccaagggcctggagttcgacgccgtattc
gtcagcgggctggaagaaggcctgttcccgcacgagaacagcgtgatggacggcaagggc
ctgcaggaggagcgccggctgatgtacgtggccatcacccgcgcccgcaagcggctatat
ctgtccagcgcgcagagccggatgctgcacggccagagccgctacccgatcccgtcgcgc
ttcatcgacgagattccggccgaactgatccattcgctgtctgctacagtgaaagcaccc
gttgcgccgcagcaggcgcggcgctccgccgccatgccgcgccggcaggcggaaaacgcc
tacggcctgtccatcggccaggcggtcagccacgccaagttcggcatcggcgtggtgata
gacgccgagggcaacggggaggatgtgcggctgcaaatcaacttcgccgaacacggcgtc
aaatggctggatatgcgctatgcgaaactgagcccggcctga
DBGET
integrated database retrieval system
