Chromobacterium vaccinii: BKX93_14980
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Entry
BKX93_14980 CDS
T04565
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cvc
Chromobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvc03016
]
BKX93_14980
Enzymes [BR:
cvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BKX93_14980
Transfer RNA biogenesis [BR:
cvc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BKX93_14980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AOZ51175
UniProt:
A0A1D9LIR8
LinkDB
All DBs
Position
complement(3220189..3222063)
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AA seq
624 aa
AA seq
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MNVFYEESGSFKVGSIVSRSDASLQVDTQHGKRAKIKSANVFLEFSSSLADFLPSADNVA
TDIDLDFLWECSPDDEFGYQDLAADYFGREPSAIEAAALISRLHGAPMYFYKKGKGRYKK
APQDALQAALAGVERKKREQEQIDGWVGELKAGALPEAIRAQLMQLLWKPDKNTLEFKAF
DQASREQNLPPLRLAHKVGGIPSVPDYLMAGFLMEYFPKGAGFGKYAPPAEPPELPVAAV
RAFSIDDANTTEIDDALSVEDLPNGNKRVGIHIAAPTLGVALDSDIEKMVLSRLSTAYFP
GDKITMLPDDVVQAFTLQEGRDCPAFSLYAEVTPEFELLAFENRIERVPVAANLRHAELE
QVFNEETLANDPGVDYPFKRELVWLWQFAEALEKRRGKHDPSRPAQHDYNIDVVDGQVSI
TIRKRGAPMDKLVSELMILANSEWGRMLAEADIPAMYRAQSMGKVRMTTRPEPHMGLGVA
QYAWSTSPLRRASDFINQRQLASMIRGEKPQFAQGDAMLFAILRDFDATYGAYLSFQDKM
EHYWCLKYLLQENITEPTASVIKEDLVRIDGLPLRLRIPGLPELARGDRVQLSVVKVDLL
TQDVELRYTGRLDHVEEAGEDEES
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttttacgaagagagcggcagtttcaaagtcggcagcatcgtgtcgcgcagc
gacgccagcctgcaggtggacacccagcacggcaaacgcgccaagatcaagagcgccaac
gtctttctggagtttagctcctcgctggcggattttctgccgtcggccgacaacgtggcc
actgacatcgacctggatttcctgtgggaatgcagccccgacgacgagttcggctaccag
gatctggccgccgactatttcggccgcgagccctccgcgatcgaggccgccgcgctgatc
agccggctgcacggcgcgccgatgtacttctacaagaagggcaagggccgctacaagaaa
gcgccgcaggacgcgctgcaggccgcgctggcaggcgtcgagcgcaagaagcgcgagcag
gagcagatagacggctgggtgggcgagctgaaggccggcgcgctgccggaagccatccgc
gcccagctgatgcaactgctgtggaagcccgacaagaacacgctggaattcaaggccttc
gatcaggccagccgcgaacagaacctgccgccgctgcgcctggcgcacaaggtgggcggc
attccgtcggtgcccgactacctgatggccggtttcctgatggagtacttccccaagggc
gccggcttcggcaagtacgcgccgccggccgagccgccggagctgccggtggccgcggtg
cgcgccttctccatcgacgacgccaacaccaccgagatcgacgacgcgctgtcggtggaa
gacctgcccaacggcaacaagcgcgtcggcatccacatcgccgcgccgacgctgggcgtg
gcgctggattccgacatcgagaagatggtgctgtcgcggctgtccaccgcctacttcccc
ggcgacaagatcaccatgctgccggacgacgtggtgcaggcgttcacactgcaggaaggg
cgcgactgcccggcgttctcgctgtacgccgaggtgacgccggagttcgaactgttggcc
ttcgaaaaccgtatcgagcgggtgccggtggccgccaacctgcgccacgccgagctggag
caggtgttcaacgaggaaacgctggccaacgatcccggcgtcgactacccgttcaagcgc
gaactggtgtggctgtggcagttcgccgaggcgctggagaagcgccgcggcaagcacgac
cccagccgcccggcgcagcacgactacaacatcgacgtcgtcgacggccaggtgtccatc
accatccgcaagcgcggcgcgccgatggacaaactggtgtccgagctgatgatcctggcc
aacagcgagtggggccggatgctggccgaggccgacatcccggcaatgtaccgcgcgcaa
agcatgggcaaggtgcggatgaccacccgccccgaaccgcacatgggcctgggcgtggcc
cagtacgcgtggagcacctcgccgctgcgccgcgccagcgacttcatcaaccagcgccag
ctggcgtccatgatccgcggcgagaagccgcagttcgcccagggcgacgcgatgctgttc
gccatcctgcgcgacttcgacgccacctacggcgcctacctgtcgttccaggacaagatg
gaacactactggtgcctgaagtacctgctgcaggaaaacatcaccgagccgaccgcgtcc
gtgatcaaggaagacttggtgcgcatcgacggcctgccgctgaggctgcgcatacccggc
ctgccggaactggcgcgcggcgaccgcgtgcagctgtcggtggtgaaggtggacctgctg
acccaggacgtggagctgcgctacaccggccgcctcgaccatgtcgaagaagccggcgag
gacgaggaaagctga
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