Chromobacterium vaccinii: BKX93_16660
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Entry
BKX93_16660 CDS
T04565
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cvc
Chromobacterium vaccinii
Pathway
cvc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKX93_16660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvc03021
]
BKX93_16660
03400 DNA repair and recombination proteins [BR:
cvc03400
]
BKX93_16660
Enzymes [BR:
cvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKX93_16660
Transcription machinery [BR:
cvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKX93_16660
DNA repair and recombination proteins [BR:
cvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKX93_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AOZ51470
UniProt:
A0A1D9LJF9
LinkDB
All DBs
Position
3577741..3578724
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATHARVSMEPFERGYAHTLGNSLRRILLSSMPGYAPTEVT
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSVVLTLKKEGEGAVLASDIELPHD
VEVINPEHVICHISSGGKIDMEVKVEKGRGYQPVSVRTSHDDNRSIGTIQLDASFSPVRR
VSFAVESARVEQRTDLDRLVLDIETNGVIEPEQAVRNAARILMDQLSIFADLQGTAVEEV
VEKAPPIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctgaaacctcgtctgatcgatgtacagccggtttcc
gccactcacgctcgcgtgtcgatggagccgttcgagcgcggctatgcccataccctgggc
aattcgctgcgtcgtatcctgctgtcgtcgatgccgggctatgctccgaccgaagtgact
atcgctggcgttttgcatgagtattccgcacttgacggcgtgcgggaggatgtcgttgac
atcctcctcaacctcaagggcgtagtgcttaagctgcatggtcgcgacagtgtcgtgctg
accttgaaaaaggaaggcgagggcgctgtcttggctagcgatatcgagctgccgcatgat
gtggaagtgatcaatccggaacacgtgatttgtcacatctcctccggcggcaagatcgac
atggaggtcaaggttgagaaggggcgcggctatcagccggtgtccgttcgcaccagccat
gacgacaaccgttccatcggtaccattcaactggacgcttccttctcgccggttcgccgc
gtgagcttcgctgtggaaagcgcccgtgttgaacagcgtaccgacctcgaccgcctggtt
ctcgacatcgagaccaacggcgtcatcgagccggagcaggctgtgcgcaacgcagcccgc
atcctgatggaccagctgtcgatctttgccgacctccagggcacagcggttgaagaagtc
gttgaaaaggcgccgccgatcgatccgatcctgctgcgtccggtagacgatcttgaactg
acggtccgttcggccaactgcctgaaagcagagaacatttattacatcggcgatctgatc
cagcgcaccgaaaccgagcttctgaagacaccgaacctcggccgcaagtcgctgaacgag
atcaaggaagttctcgcttccaagggcctgactctcggcatgaagctcgagaactggcct
ccggctggtctggaaaagccgtaa
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