Chromobacterium vaccinii: BKX93_18195
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Entry
BKX93_18195 CDS
T04565
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cvc
Chromobacterium vaccinii
Pathway
cvc03030
DNA replication
cvc03430
Mismatch repair
cvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKX93_18195
03430 Mismatch repair
BKX93_18195
03440 Homologous recombination
BKX93_18195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvc03032
]
BKX93_18195
03400 DNA repair and recombination proteins [BR:
cvc03400
]
BKX93_18195
Enzymes [BR:
cvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKX93_18195
DNA replication proteins [BR:
cvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKX93_18195
DNA repair and recombination proteins [BR:
cvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKX93_18195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AOZ52957
UniProt:
A0A1D9LNU6
LinkDB
All DBs
Position
3905456..3906853
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AA seq
465 aa
AA seq
DB search
MFAQPCAIIDLETTGGNIARDRITEVGVVLIDGERVERLSWLVNPGQPIPPFIENMTGIS
NEMVAGAPPFAELADELLATLRGRLLLAHNARFDYGFLRNEFRRHGLRFQARALCTVKLS
RRLYPQHFKHSLDSLIARHGIEMPERHRALADAEAVYRFIQIAGAELGEDKVAHEAAQLL
SQPAELSSLPAELQQQVEDMPDSAGVYAMFGEDGRALYIGRATNLYRKALGHFAERKPGH
KSHEVRIDEPVARVEWRESLSEFGARLLELQWLGRLQPLHNPRARMMGEVCTLQLQAGDD
AFSRPVPVSARDIDFTRTADLYGLFRHAREARKALAQIALAQGLCQSVLGVEQVTSRKGA
PCAAYRIRRCRGACVGDEGADSHNARLLAALQRLKVKPWPFEGAVAVAERDEVCGDVVEH
LFDRWCYLGSRRNGGALEGEPAFDIDYYKLLESELRKPERGVSPQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ctgtttgcgcagccttgcgccatcatcgacctggaaaccaccggcggcaacatcgcgcgc
gaccgcatcaccgaagtcggcgtggtgctgatagacggcgaacgcgtcgagcgcctgtcc
tggctggtcaatcccggccagcccattccgcccttcatcgaaaacatgaccggcatcagc
aacgagatggtggccggcgcgccgccgttcgccgaactggccgacgagctgctggccacg
ctgcgcggccgtctgctgctggcgcacaacgcccgcttcgactacggcttcctcagaaat
gaattccgccgccatggcctgcgcttccaggcgcgcgcgctgtgcacggtcaagctgtcg
cgccgactgtatccacagcatttcaagcacagcctggacagcctgatcgcccgccacggc
atagaaatgccggagcgccaccgcgcgctggccgacgctgaggcggtctaccgcttcatt
cagatcgccggcgcggagctgggcgaggacaaggtggcgcatgaggccgcgcaactattg
tcgcaaccggccgaactgtccagcctgccggcggagctgcagcagcaggtggaggatatg
ccggattcggccggcgtctacgcgatgttcggcgaggatggccgcgcgttgtacatcggc
cgcgcgaccaatctgtaccgcaaggcgttgggccacttcgccgaacgcaagcccgggcac
aagagccatgaggtgcggatagacgagccggtggcgagggtggagtggcgcgaaagtttg
agcgagttcggcgcccgtttgctggagttgcagtggcttggccgcttgcagccgctccat
aacccgcgggccaggatgatgggcgaggtgtgcacgctgcagctgcaagccggcgacgac
gctttttcgcggccggtcccggtatccgcccgcgacatcgacttcacccgcaccgccgat
ctctacggcttgttccgccacgcgcgcgaggcgcgcaaggcgctggcgcagatcgcgctg
gctcaggggctatgccagtcggtgctgggggtggagcaggtgaccagccgcaagggcgcg
ccttgcgccgcctaccggatccgccgctgccgcggcgcctgcgtcggcgacgagggcgcc
gacagccacaacgccaggttgctggcggcgctgcagcggctcaaggtcaaaccgtggccg
ttcgagggcgcggtggcggtggcggagcgcgacgaggtgtgcggcgatgtggtggagcac
ctgttcgaccgctggtgctatctgggcagccgccgcaatggcggcgcgctggagggcgag
ccggctttcgacatcgattactacaagctgctggagagcgagctgcgcaaaccggagagg
ggcgtgtcgccgcagtaa
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