Carnobacterium viridans: LHA31_01620
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Entry
LHA31_01620 CDS
T08019
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
cvd
Carnobacterium viridans
Pathway
cvd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LHA31_01620 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cvd03011
]
LHA31_01620 (rpsA)
Ribosome [BR:
cvd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LHA31_01620 (rpsA)
Bacteria
LHA31_01620 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
UDE95510
LinkDB
All DBs
Position
complement(336120..337340)
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AA seq
406 aa
AA seq
DB search
MTENEKNQEVNEQESMIDAMNSVQEINIGDSVKGEILAIQDNKQAIVGIIGGGVEGVIPN
NELSAAPFENVTDVVNVGDIVDLVVIKEIKEKENGSYLLSKRRIDAKKVWEKVQKEFDEG
AIIEAPVKEVVKGGLVVDVGVRGFVPASMVDVHFVEDFSRYKGQTLKFKIIEIEPSENRL
ILSHKAVVEAENEEKKKGLLSHLVEGDIVKGKIARLTNFGAFIDLGGVDGLVHISQIAYE
HVKDPADVLTVGEEVNVKILSVNEEEGRISLSIKETLPGPWDDIEERAAVGSVLDGLVKR
LTSFGAFVEIFPGVEGLVHISQISHNHIATPHEVLSEGAEIKVKVLEVNPTDQRLSLSIK
ALEEKPNQPKASQAETNYDLPEEDTGFTLGDILGDQLSDITTDEEN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaatgaaaaaaaccaagaggtcaacgaacaagagtcaatgattgatgcaatg
aatagtgttcaagaaattaatattggagatagtgttaaaggtgaaattttagcgattcaa
gataataagcaggctatagttggtattattggcggtggagttgaaggtgtcattccgaac
aatgaattatcagctgctccatttgaaaatgttacagatgttgtaaatgtaggagatatc
gtagatctagttgttattaaagaaattaaagaaaaagaaaacggcagttatttattatca
aaacgccgtattgacgctaaaaaagtatgggaaaaagttcaaaaagaatttgatgaaggt
gccattattgaagcacctgttaaagaagtagtaaaaggcggtttagttgtagatgtaggc
gtcagaggatttgtacctgcttctatggtagatgttcattttgtagaagatttttctaga
tacaaaggacagacattgaaatttaaaatcattgaaatcgaacctagtgaaaatcgttta
attctttctcataaagctgttgttgaagcagaaaacgaagaaaagaaaaaagggttgctt
agtcatttggttgaaggcgatattgtaaaagggaaaatcgctcgtttaacaaattttgga
gcgtttattgatcttggcggtgtagatggacttgtccacatctcgcaaattgcttatgag
catgtaaaagatcctgccgatgtcttgacagtcggagaagaagttaacgtgaagattctt
tctgtgaatgaagaagagggtcgtatttctctttctattaaagaaacattgcctggacca
tgggacgatattgaagagcgtgcagctgtaggttctgttctagatggcctggttaaacgt
ttaacaagttttggagcatttgttgaaatcttcccaggagttgaaggacttgttcacatt
tcgcaaatttcgcacaaccacatagctactccgcatgaagttttaagtgaaggtgccgaa
attaaagtgaaggtattagaagttaatccaacggatcagagactttctttaagtatcaag
gcattagaagagaaacctaatcaaccgaaagcaagtcaagcagaaaccaattacgatttg
cctgaagaagatactggttttactttaggtgatattttaggcgatcaattgtctgacatt
acaacagatgaggagaactaa
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