Carnobacterium viridans: LHA31_01825
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Entry
LHA31_01825 CDS
T08019
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvd03019
]
LHA31_01825 (rnc)
03009 Ribosome biogenesis [BR:
cvd03009
]
LHA31_01825 (rnc)
03036 Chromosome and associated proteins [BR:
cvd03036
]
LHA31_01825 (rnc)
Enzymes [BR:
cvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LHA31_01825 (rnc)
Messenger RNA biogenesis [BR:
cvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHA31_01825 (rnc)
Ribosome biogenesis [BR:
cvd03009
]
Eukaryotic type
90S particles
RNase
LHA31_01825 (rnc)
Prokaryotic type
rRNA processing factors
LHA31_01825 (rnc)
Chromosome and associated proteins [BR:
cvd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LHA31_01825 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
UDE95551
LinkDB
All DBs
Position
complement(380892..381587)
Genome browser
AA seq
231 aa
AA seq
DB search
MDDAFLKQLKTKFDLVFHDLSYLEEAFTHSSYVNEHRNLELKDNERIEFLGDAVLELTVS
RFLYELYPNLPEGKLTRLRATIVCEASLSQFAKEYEFDQFIRLGRGEERMNGRKRPALLC
DLFESFIGALYLDQGIDSVLSFLEQTIFPKIKSGAFSHVMDHKTNLQEFLQQKGEIGIDY
QLVDEIGPAHQKAFVVEVRAEGQVLGQGQGKTKKAAEQVAAENALLALQEK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgcatttttaaaacagttaaaaactaagtttgatttggtttttcacgacctt
tcttatttagaagaagcattcacccattcatcatatgtgaatgagcacaggaatcttgaa
ttaaaggataacgaaagaattgaatttttaggagatgcggtactggaattaaccgtatca
agatttttatacgaattatatcctaacttgcctgaaggaaaattaacacgattgagagcg
actattgtttgtgaagcgagtttgagtcaatttgcaaaagaatacgaattcgatcaattt
atccgtttaggcagaggcgaagaacgtatgaatggacgaaaacgtccagcattactttgc
gatttatttgaatcctttattggagcgttatatttagatcaaggaatagatagcgtatta
tcttttcttgaacaaacgatttttccaaaaatcaagtccggtgctttctcacatgtgatg
gatcataaaactaatttacaagagtttttacaacaaaaaggcgaaattggcatcgactat
caattagttgatgaaattgggccagcacatcaaaaggcttttgtggtagaagtacgtgct
gaagggcaagtacttggacaagggcaaggaaaaacaaaaaaagcagctgaacaagtggct
gcagaaaatgcattacttgctttgcaagaaaaatag
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