Carnobacterium viridans: LHA31_02070
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Entry
LHA31_02070 CDS
T08019
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cvd
Carnobacterium viridans
Pathway
cvd03030
DNA replication
cvd03430
Mismatch repair
cvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHA31_02070 (holA)
03430 Mismatch repair
LHA31_02070 (holA)
03440 Homologous recombination
LHA31_02070 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvd03032
]
LHA31_02070 (holA)
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_02070 (holA)
Enzymes [BR:
cvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHA31_02070 (holA)
DNA replication proteins [BR:
cvd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHA31_02070 (holA)
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHA31_02070 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UDE95592
LinkDB
All DBs
Position
complement(433116..434150)
Genome browser
AA seq
344 aa
AA seq
DB search
MNFVSELAKIRKGTIAHVYVVLGTESYLASVARKTLLDSLLSAEELELNYGAYDMEEVSI
GTALEDAESIPFFGDRRLVFVDRPIFLTGDKTKLKIEHDVKWLESYLTHPSESTTLVFFA
PYEKLDERKKITKLLKKTATIIEVNALSEKDMRKYIKDTIANEEYRYSPEAFELFIQLTD
AKLSVAMGELPKLFIYAQDTKFITLEAVQELVAKSLEQNIFALNEYVLKKDAGQALNLYQ
DLLLQKEDPIKINAIMTSQFRLLIQVKILEKKGYQQGDIAKQLKTHPYRVKLAIQQMRKI
EEHSLIEAYNGLIDAEYRLKTGKGDKEMQFELFVLQYAQKKTAN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttgtatcagaattagcaaaaataagaaaaggcacgattgcacatgtttacgtt
gtgttaggaacagaatcctatttggcaagcgtagctagaaaaacactgttggactcattg
cttagtgcagaagaattggaattaaactacggtgcttacgatatggaagaagtttctata
ggaacagccttagaggatgcagaatcgattccgttttttggtgatcgtcgtctcgttttt
gtagataggcctatcttcttaactggtgataaaacaaaattaaagatagaacatgatgta
aaatggttagaaagttacttaactcatccttctgagtcaacgacacttgtattctttgct
ccatatgaaaaattagatgaacgcaaaaaaataactaagttactaaaaaaaactgccacc
ataatagaagtaaatgcattatcagaaaaagatatgcgaaaatacatcaaggatactata
gcaaatgaagagtaccgttattcaccagaagcatttgaattatttattcaattaacagat
gcaaaattatctgtagccatgggagaattgccgaaactttttatttatgctcaagatact
aaatttattacactagaagccgttcaagaattagtggctaaatctttagaacaaaacatt
tttgcgctaaacgaatacgttttgaaaaaagacgcaggacaagctctcaatttataccaa
gatttattattacaaaaagaagatcctattaaaataaatgcgattatgacttctcaattt
agattgcttatccaagtcaaaattttagaaaaaaaagggtatcagcaaggagatattgct
aagcagttaaaaacgcatccctatcgtgtgaaattagctattcaacaaatgagaaaaatt
gaggagcattcattgattgaagcgtataatggattgattgatgctgagtatcgactaaag
acaggaaaaggcgataaagaaatgcaatttgaattattcgttctgcagtatgctcaaaaa
aagacagcgaattga
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