Carnobacterium viridans: LHA31_02270
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Entry
LHA31_02270 CDS
T08019
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
cvd
Carnobacterium viridans
Pathway
cvd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHA31_02270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cvd02022
]
LHA31_02270
Two-component system [BR:
cvd02022
]
NarL family
LiaS-LiaR (cell wall stress response)
LHA31_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
DUF6115
HTH_24
HTH_40
BioW
EF-G-binding_N
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UDE95625
LinkDB
All DBs
Position
complement(477826..478458)
Genome browser
AA seq
210 aa
AA seq
DB search
MIKVLLVDDHEMVRLGVSSYLSIQSDIEVIGEAENGKIGFEKAMELRPDVILMDLVMDIM
DGIESTKAIMKEWPEAKIVIVTSFIDDEKVYPALEAGASSYILKTSTASTIANAIRSTYK
GETILEPEVTGKMMERLTKKPIHQLHEDLTNREQEILMLIAQGNSNQEIADALFITLKTV
KTHVSNILAKLEVEDRTQAAIYAFKHHLIE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtattattagtggacgatcatgaaatggttcgattaggagtttcctcttac
ttatccatccaaagtgacatagaggttataggagaagctgagaacggaaaaattggtttt
gaaaaggcaatggagctgcgtccagatgttattttgatggacttagtgatggatataatg
gatggtatcgagtcaacaaaagctattatgaaagaatggcctgaagcaaaaatcgttatt
gtaactagttttattgatgacgaaaaagtttaccctgcactggaagcaggagcgtccagc
tatattttaaaaacatcaactgcaagtacaattgcgaatgcgattcgctctacatataag
ggtgaaacgattctggaaccggaagtaaccggaaaaatgatggaacgtctaactaaaaag
cctattcatcaactacatgaggatctaacgaatcgtgaacaagagattctcatgttgatt
gctcaaggcaattctaaccaagaaattgctgacgcacttttcataacccttaaaacggtt
aaaacacatgtttcaaatatattagctaagttagaagtagaagatcgaacgcaagcagca
atttatgcttttaaacatcaccttattgagtaa
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integrated database retrieval system
