Carnobacterium viridans: LHA31_02675
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Entry
LHA31_02675 CDS
T08019
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cvd
Carnobacterium viridans
Pathway
cvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LHA31_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_02675
Enzymes [BR:
cvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LHA31_02675
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LHA31_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
Helicase_RecD
SLFN-g3_helicase
PIF1
RsgA_GTPase
UvrD-helicase
ResIII
HHH_RecD2
TraI_hel_assoc_N
AAA_22
NPHP3_N
UvrD_C
P-loop_TraG
DUF498
ATP-synt_ab
MeaB
AAA_16
SH3_13
DEAD
AAA_5
nSTAND3
AAA_7
nSTAND1
PhoH
AAA_12
IstB_IS21
Sigma54_activat
DUF5906
TrwB_AAD_bind
Torsin
TssR_M
UDPG_MGDP_dh_C
TsaE
AAA
Motif
Other DBs
NCBI-ProteinID:
UDE95700
LinkDB
All DBs
Position
complement(538917..540386)
Genome browser
AA seq
489 aa
AA seq
DB search
MKPFTQSLESNIKQTFTYSHAKNKYNYEGRAEGYDSLSFFKRMLVQKNPFQILMDLDRVA
FKRAKQIILTHEIPYTPKQEEQARIYHEVTERMQKDRSDIVPMYQENLEGTGVVIYKEPF
FLTTVETIKLHDIINHMPKSQKTHNVVYEHRLSKQISSSKEQLNALQKCLSNQTSVLIGG
AGTGKSFVTAEIIKQLQANGKNVSVLAPTHKAKEALQDKIGTTSTVRTIHSFVHKPNDCD
AIVIDESGMLSTPLLLKLLNHHTTEQLIFVGDKNQLPPIEYGRPFERIQKLFPTSELKEN
KRSESADIIALGREILGIPQNANMRMPNIALVSSISEAHAQGAEVVLSFMNNTVKQINEE
RKIKNGIQTLSPLFSVGDKIIATTNEAGRFYNGQLFKITHPNRAVNQKTNVPIIFRSRKD
LEHNFSLAYGLTIHKSQGSEWDVVAYQPSSYDTQNLAYVAVTRAKKRLIIIGNDIKNEYK
KDKDWSQLV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttttacgcaatctttagaatcaaatatcaaacaaacatttacctattctcat
gcaaaaaacaagtacaactatgaaggccgggcagagggatacgattctctgtctttcttc
aaaagaatgttagtgcaaaaaaatccttttcaaatactgatggatttggatcgagtagct
tttaaacgcgctaaacaaatcattttaactcacgaaataccttatacaccaaaacaagaa
gaacaagctcgcatttatcatgaagtaactgaacgtatgcaaaaggatagaagtgatatc
gtaccgatgtatcaagaaaatttagaaggaacaggcgtagttatttacaaagaacccttc
tttttaacaacagtcgaaacaatcaagcttcatgacatcatcaaccatatgccgaagtca
caaaagacgcataacgtcgtatatgaacatcgtttatctaaacaaatatcgtcgtcaaaa
gaacaacttaacgccttgcagaaatgtttatcaaatcaaacatctgtattaattggtgga
gcaggaacaggaaaaagttttgtaacagccgaaattattaagcaactacaagcgaacgga
aaaaatgtttctgtacttgcaccaactcacaaagcgaaagaagcactacaagataagata
ggcacgacttcaaccgtccgtactattcattcattcgtacacaagccaaatgattgcgat
gcaattgtgatagatgaaagcggcatgttgtcaacaccactacttttaaaactgctgaac
catcacacgactgaacaattgatattcgttggtgataaaaaccaactgccgccaatcgaa
tatggcagaccttttgaacgtattcaaaaactgttcccaacaagtgaattaaaagaaaat
aaacgatcagaatcagctgacattatcgcattaggccgtgaaatactaggtattcctcaa
aacgcaaacatgagaatgccaaacattgctttagtttcttcaatatctgaagcacatgca
caaggtgcggaagttgtgctttcgttcatgaataacactgttaaacaaataaatgaagaa
cgaaaaataaagaatggtattcaaacactttctccattattttcagtcggcgataaaatc
atcgcaacaacaaacgaagctggacgattctacaatggtcaactatttaaaattacacat
ccaaatcgtgcagtcaatcaaaaaacaaacgtgcctatcatattccgttccagaaaagac
ttggaacacaacttttcacttgcttacggtctaaccatccacaaatcacaaggaagtgaa
tgggacgtagtagcttatcaaccaagttcttatgacacacagaatttagcttatgttgct
gtaactcgtgctaaaaaacgtcttatcatcattggaaatgacataaagaacgagtacaaa
aaagacaaagattggagccaactcgtttga
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