Carnobacterium viridans: LHA31_03415
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Entry
LHA31_03415 CDS
T08019
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvd03019
]
LHA31_03415
Messenger RNA biogenesis [BR:
cvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHA31_03415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MtmB
Motif
Other DBs
NCBI-ProteinID:
UDE95832
LinkDB
All DBs
Position
complement(683841..684809)
Genome browser
AA seq
322 aa
AA seq
DB search
MEKKLFEYTNDDTFDIYLLIKSADIRVAKNGKKFIAFTFQDTSGQMDGKYWDASEDDIAA
FTAGKVVKVSGKRELYQGNPQIKLFKIAVTKSGDPDNPDLYVERAPLKKEDMMEEINDTL
FEITNANMNRIVRYLLNHYQKPFFQHPAAKRFHHAFTGGLAFHTVSMLRIAKTIATQYED
INKPLLYAGVILHDLGKIIELSGPISTEYTLEGNLLGHIVIVDEEITKACLALKIDEKSE
DVLLLKHMVLAHHGLLEYGSPVRPKLREAEILYMIDNLDATVNMLNSTLNRTEPGMFTER
IFGLDNRTFYKPNESEKTTDSK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaattatttgaatatacgaacgatgatactttcgacatttatttactaatt
aaatcagctgatattcgtgttgctaaaaatggcaaaaaatttattgcttttacatttcag
gatacaagcggccaaatggatggtaaatattgggatgcgtcagaagatgatattgcagcc
tttactgctggaaaagtagtaaaagtttcagggaaaagagaactttatcaagggaatcct
caaatcaagctatttaaaattgccgtaacaaaatctggagatccagataatccagattta
tatgttgaaagagccccattaaagaaagaagatatgatggaagaaataaatgatacatta
tttgagattacaaatgcgaatatgaatcggattgtacgctatttattgaatcattatcaa
aaacccttttttcaacatccagcagctaaacgatttcatcatgcttttactggcggacta
gctttccatacggtctctatgttaagaattgcaaagacaatcgcgactcaatatgaagat
atcaataagccgttgctgtatgctggtgttattttacatgatttgggcaaaattattgaa
ctatcaggaccaatatctacagagtacactttagaaggaaatcttttaggccatattgta
atagtagatgaagaaattacaaaagcttgtcttgctctaaaaattgatgaaaaaagtgaa
gatgttttgcttttgaagcatatggtattggctcatcacggactgcttgagtatggttct
ccggttagaccaaagttaagagaagctgaaattttatatatgattgataatttagatgct
actgtaaatatgttaaattcgacattaaatagaacagagccagggatgtttacagaaaga
atttttggattagacaatcggacattctataaaccaaatgaatcagaaaaaacaacggat
agtaaataa
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